Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 AFG3L1P-217ENST00000557444 2447 ntBASIC17.07■□□□□ 0.32
CLCC1Q96S66 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCC1Q96S66 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCC1Q96S66 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCC1Q96S66 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCC1Q96S66 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCC1Q96S66 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCC1Q96S66 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCC1Q96S66 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 MIR638-201ENST00000385237 100 ntBASIC17.06■□□□□ 0.32
CLCC1Q96S66 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCC1Q96S66 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.06■□□□□ 0.32
CLCC1Q96S66 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCC1Q96S66 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.06■□□□□ 0.32
CLCC1Q96S66 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCC1Q96S66 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCC1Q96S66 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCC1Q96S66 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCC1Q96S66 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCC1Q96S66 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 MIR572-201ENST00000384983 95 ntBASIC17.04■□□□□ 0.32
CLCC1Q96S66 AC105265.2-201ENST00000467189 838 ntBASIC17.04■□□□□ 0.32
CLCC1Q96S66 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCC1Q96S66 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 FEM1AP1-201ENST00000431297 1995 ntBASIC17.04■□□□□ 0.32
CLCC1Q96S66 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCC1Q96S66 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCC1Q96S66 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCC1Q96S66 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CLCC1Q96S66 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCC1Q96S66 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLCC1Q96S66 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCC1Q96S66 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.03■□□□□ 0.32
CLCC1Q96S66 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.03■□□□□ 0.32
CLCC1Q96S66 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms