Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 AC006455.2-201ENST00000429931 906 ntBASIC15.35■□□□□ 0.05
AP1S3Q96PC3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
AP1S3Q96PC3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 LINC01006-201ENST00000333319 2292 ntBASIC15.34■□□□□ 0.05
AP1S3Q96PC3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.34■□□□□ 0.05
AP1S3Q96PC3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP1S3Q96PC3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.33■□□□□ 0.05
AP1S3Q96PC3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
AP1S3Q96PC3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP1S3Q96PC3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 LETM1P2-201ENST00000597330 2178 ntBASIC15.33■□□□□ 0.04
AP1S3Q96PC3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP1S3Q96PC3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 FEM1AP1-201ENST00000431297 1995 ntBASIC15.32■□□□□ 0.04
AP1S3Q96PC3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S3Q96PC3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms