Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP6Q96FZ7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 AL512631.2-201ENST00000604634 923 ntBASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 AC131212.1-201ENST00000613771 668 ntBASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 LETM1P2-201ENST00000597330 2178 ntBASIC20.44■□□□□ 0.86
CHMP6Q96FZ7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 AC011484.1-201ENST00000377652 1995 ntBASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP6Q96FZ7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 NEFHP1-201ENST00000412845 2629 ntBASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP6Q96FZ7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms