Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 IRS3P-201ENST00000223076 1006 ntBASIC17.61■□□□□ 0.41
CPNE2Q96FN4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 DUX4L2-201ENST00000561772 1275 ntBASIC17.61■□□□□ 0.41
CPNE2Q96FN4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 DUX4L6-201ENST00000626483 1275 ntBASIC17.61■□□□□ 0.41
CPNE2Q96FN4 DUX4L1-201ENST00000627662 1275 ntBASIC17.61■□□□□ 0.41
CPNE2Q96FN4 DUX4L8-201ENST00000629013 1275 ntBASIC17.61■□□□□ 0.41
CPNE2Q96FN4 DUX4L3-201ENST00000630187 1275 ntBASIC17.61■□□□□ 0.41
CPNE2Q96FN4 DUX4L7-201ENST00000630678 1275 ntBASIC17.61■□□□□ 0.41
CPNE2Q96FN4 DUX4L5-201ENST00000630834 1275 ntBASIC17.61■□□□□ 0.41
CPNE2Q96FN4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE2Q96FN4 AC092720.2-201ENST00000602388 1665 ntBASIC17.61■□□□□ 0.41
CPNE2Q96FN4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 AC027612.3-201ENST00000413684 1047 ntBASIC17.6■□□□□ 0.41
CPNE2Q96FN4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 AC010141.2-201ENST00000452426 721 ntBASIC17.6■□□□□ 0.41
CPNE2Q96FN4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 LINC02228-203ENST00000641970 1355 ntBASIC17.6■□□□□ 0.41
CPNE2Q96FN4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE2Q96FN4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE2Q96FN4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.58■□□□□ 0.41
CPNE2Q96FN4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE2Q96FN4 AC116050.2-201ENST00000612102 1779 ntBASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms