Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM11Q96F44 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM11Q96F44 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM11Q96F44 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM11Q96F44 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM11Q96F44 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRIM11Q96F44 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.53■■□□□ 1.04
TRIM11Q96F44 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.53■■□□□ 1.04
TRIM11Q96F44 AL162412.1-201ENST00000567129 965 ntBASIC21.53■■□□□ 1.04
TRIM11Q96F44 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.53■■□□□ 1.04
TRIM11Q96F44 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM11Q96F44 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM11Q96F44 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM11Q96F44 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM11Q96F44 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM11Q96F44 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRIM11Q96F44 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM11Q96F44 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM11Q96F44 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM11Q96F44 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 AC007322.4-201ENST00000509611 723 ntBASIC21.51■■□□□ 1.03
TRIM11Q96F44 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 AC137761.2-201ENST00000561729 223 ntBASIC21.51■■□□□ 1.03
TRIM11Q96F44 AC145350.3-201ENST00000569033 163 ntBASIC21.51■■□□□ 1.03
TRIM11Q96F44 AC013268.1-206ENST00000638368 961 ntBASIC21.51■■□□□ 1.03
TRIM11Q96F44 AC112229.1-201ENST00000639295 961 ntBASIC21.51■■□□□ 1.03
TRIM11Q96F44 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM11Q96F44 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM11Q96F44 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM11Q96F44 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM11Q96F44 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.5■■□□□ 1.03
TRIM11Q96F44 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM11Q96F44 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM11Q96F44 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.5■■□□□ 1.03
TRIM11Q96F44 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM11Q96F44 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM11Q96F44 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM11Q96F44 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM11Q96F44 AC099778.1-201ENST00000568593 1911 ntBASIC21.49■■□□□ 1.03
TRIM11Q96F44 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM11Q96F44 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM11Q96F44 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM11Q96F44 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM11Q96F44 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM11Q96F44 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM11Q96F44 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM11Q96F44 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM11Q96F44 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM11Q96F44 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM11Q96F44 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM11Q96F44 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM11Q96F44 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM11Q96F44 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
TRIM11Q96F44 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM11Q96F44 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
TRIM11Q96F44 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM11Q96F44 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM11Q96F44 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM11Q96F44 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM11Q96F44 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM11Q96F44 AC087633.2-202ENST00000565166 1439 ntBASIC21.48■■□□□ 1.03
TRIM11Q96F44 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms