Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCC1Q92922 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCC1Q92922 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCC1Q92922 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.23■■□□□ 1.79
SMARCC1Q92922 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC26.23■■□□□ 1.79
SMARCC1Q92922 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCC1Q92922 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SMARCC1Q92922 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.23■■□□□ 1.79
SMARCC1Q92922 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SMARCC1Q92922 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCC1Q92922 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMARCC1Q92922 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.23■■□□□ 1.79
SMARCC1Q92922 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCC1Q92922 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCC1Q92922 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCC1Q92922 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC26.22■■□□□ 1.79
SMARCC1Q92922 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.22■■□□□ 1.79
SMARCC1Q92922 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SMARCC1Q92922 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCC1Q92922 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMARCC1Q92922 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCC1Q92922 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCC1Q92922 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCC1Q92922 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 AC023632.3-201ENST00000521633 145 ntBASIC26.21■■□□□ 1.79
SMARCC1Q92922 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 NBPF21P-201ENST00000425093 1451 ntBASIC26.21■■□□□ 1.79
SMARCC1Q92922 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCC1Q92922 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMARCC1Q92922 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
SMARCC1Q92922 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
SMARCC1Q92922 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26.2■■□□□ 1.79
SMARCC1Q92922 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCC1Q92922 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.2■■□□□ 1.78
SMARCC1Q92922 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.2■■□□□ 1.78
SMARCC1Q92922 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SMARCC1Q92922 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCC1Q92922 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC26.2■■□□□ 1.78
SMARCC1Q92922 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.2■■□□□ 1.78
SMARCC1Q92922 KRT18P35-201ENST00000510488 1269 ntBASIC26.2■■□□□ 1.78
SMARCC1Q92922 AC073195.1-201ENST00000607241 877 ntBASIC26.2■■□□□ 1.78
SMARCC1Q92922 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC26.2■■□□□ 1.78
SMARCC1Q92922 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SMARCC1Q92922 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC1Q92922 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC1Q92922 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
SMARCC1Q92922 FAM197Y1-201ENST00000421178 764 ntBASIC26.19■■□□□ 1.78
SMARCC1Q92922 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC26.19■■□□□ 1.78
SMARCC1Q92922 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.19■■□□□ 1.78
SMARCC1Q92922 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC26.19■■□□□ 1.78
SMARCC1Q92922 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC26.19■■□□□ 1.78
SMARCC1Q92922 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC26.19■■□□□ 1.78
SMARCC1Q92922 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC1Q92922 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC1Q92922 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMARCC1Q92922 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.18■■□□□ 1.78
SMARCC1Q92922 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC1Q92922 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.18■■□□□ 1.78
SMARCC1Q92922 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC1Q92922 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC1Q92922 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC1Q92922 NT5C-211ENST00000582170 653 ntTSL 3 BASIC26.18■■□□□ 1.78
SMARCC1Q92922 AC145285.6-201ENST00000604632 637 ntBASIC26.18■■□□□ 1.78
SMARCC1Q92922 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SMARCC1Q92922 AC092865.7-201ENST00000641832 219 ntBASIC26.18■■□□□ 1.78
SMARCC1Q92922 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.18■■□□□ 1.78
SMARCC1Q92922 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SMARCC1Q92922 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SMARCC1Q92922 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC26.17■■□□□ 1.78
SMARCC1Q92922 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC26.17■■□□□ 1.78
SMARCC1Q92922 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC26.17■■□□□ 1.78
SMARCC1Q92922 DECR2-212ENST00000627716 352 ntTSL 2 BASIC26.17■■□□□ 1.78
SMARCC1Q92922 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC26.17■■□□□ 1.78
SMARCC1Q92922 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCC1Q92922 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC26.16■■□□□ 1.78
SMARCC1Q92922 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC26.16■■□□□ 1.78
SMARCC1Q92922 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SMARCC1Q92922 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms