Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 KRT8P36-201ENST00000489121 1440 ntBASIC21.73■■□□□ 1.07
DDX1Q92499 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX1Q92499 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX1Q92499 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX1Q92499 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX1Q92499 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX1Q92499 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.73■■□□□ 1.07
DDX1Q92499 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX1Q92499 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX1Q92499 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
DDX1Q92499 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX1Q92499 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX1Q92499 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX1Q92499 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
DDX1Q92499 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX1Q92499 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
DDX1Q92499 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
DDX1Q92499 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX1Q92499 AC092720.2-201ENST00000602388 1665 ntBASIC21.72■■□□□ 1.07
DDX1Q92499 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
DDX1Q92499 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX1Q92499 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX1Q92499 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX1Q92499 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX1Q92499 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX1Q92499 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX1Q92499 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX1Q92499 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX1Q92499 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX1Q92499 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.72■■□□□ 1.07
DDX1Q92499 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX1Q92499 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX1Q92499 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX1Q92499 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX1Q92499 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX1Q92499 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX1Q92499 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX1Q92499 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX1Q92499 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX1Q92499 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX1Q92499 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX1Q92499 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX1Q92499 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX1Q92499 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX1Q92499 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
DDX1Q92499 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX1Q92499 AC068338.2-201ENST00000563278 1430 ntBASIC21.71■■□□□ 1.07
DDX1Q92499 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX1Q92499 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX1Q92499 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
DDX1Q92499 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX1Q92499 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX1Q92499 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX1Q92499 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX1Q92499 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX1Q92499 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
DDX1Q92499 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX1Q92499 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX1Q92499 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX1Q92499 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX1Q92499 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX1Q92499 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
DDX1Q92499 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX1Q92499 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
DDX1Q92499 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX1Q92499 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
DDX1Q92499 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
DDX1Q92499 TSPY6P-201ENST00000448518 926 ntBASIC21.69■■□□□ 1.06
DDX1Q92499 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
DDX1Q92499 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX1Q92499 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
DDX1Q92499 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
DDX1Q92499 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
DDX1Q92499 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX1Q92499 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX1Q92499 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
DDX1Q92499 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX1Q92499 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
DDX1Q92499 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX1Q92499 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX1Q92499 AC083906.2-201ENST00000511578 360 ntBASIC21.68■■□□□ 1.06
DDX1Q92499 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX1Q92499 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX1Q92499 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX1Q92499 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX1Q92499 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX1Q92499 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX1Q92499 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX1Q92499 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms