Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF138Q8WVD3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF138Q8WVD3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF138Q8WVD3 AP005212.1-201ENST00000581547 1997 ntBASIC18.49■□□□□ 0.55
RNF138Q8WVD3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF138Q8WVD3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF138Q8WVD3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF138Q8WVD3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RNF138Q8WVD3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF138Q8WVD3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF138Q8WVD3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 AC092720.2-201ENST00000602388 1665 ntBASIC18.48■□□□□ 0.55
RNF138Q8WVD3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 HLA-B-256ENST00000639848 1089 ntBASIC18.48■□□□□ 0.55
RNF138Q8WVD3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RNF138Q8WVD3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF138Q8WVD3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 FEM1AP1-201ENST00000431297 1995 ntBASIC18.46■□□□□ 0.55
RNF138Q8WVD3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 AC020907.5-201ENST00000624372 1936 ntBASIC18.46■□□□□ 0.55
RNF138Q8WVD3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF138Q8WVD3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF138Q8WVD3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 AC073314.1-201ENST00000568729 2216 ntBASIC18.45■□□□□ 0.54
RNF138Q8WVD3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 AC023632.3-201ENST00000521633 145 ntBASIC18.45■□□□□ 0.54
RNF138Q8WVD3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 KRT18P6-201ENST00000555540 1265 ntBASIC18.45■□□□□ 0.54
RNF138Q8WVD3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 AC060766.5-201ENST00000590539 871 ntBASIC18.45■□□□□ 0.54
RNF138Q8WVD3 GABARAPL3-202ENST00000624044 1851 ntBASIC18.45■□□□□ 0.54
RNF138Q8WVD3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF138Q8WVD3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF138Q8WVD3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms