Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ALMS1Q8TCU4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ALMS1Q8TCU4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 TPM4P1-201ENST00000436100 807 ntBASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 AC116562.2-201ENST00000507042 360 ntBASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ALMS1Q8TCU4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 NIFKP9-201ENST00000419265 221 ntBASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 INGX-201ENST00000359239 846 ntBASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 FAM87A-204ENST00000613235 858 ntBASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ALMS1Q8TCU4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 AC026271.3-201ENST00000571884 352 ntBASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
ALMS1Q8TCU4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms