Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLHC1Q8NHS4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 SMG8-203ENST00000578922 2178 ntBASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLHC1Q8NHS4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 MIR2861-201ENST00000636310 90 ntBASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLHC1Q8NHS4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 RBM17P2-201ENST00000616397 1405 ntBASIC19.48■□□□□ 0.71
CLHC1Q8NHS4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 AC091799.1-201ENST00000422823 811 ntBASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 KRT18P20-201ENST00000548986 1279 ntBASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms