Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC32.12■■■□□ 2.73
CFAP43Q8NDM7 AL356652.1-201ENST00000615962 565 ntBASIC32.12■■■□□ 2.73
CFAP43Q8NDM7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC32.12■■■□□ 2.73
CFAP43Q8NDM7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC32.12■■■□□ 2.73
CFAP43Q8NDM7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CFAP43Q8NDM7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CFAP43Q8NDM7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP43Q8NDM7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC32.1■■■□□ 2.73
CFAP43Q8NDM7 Z98882.1-201ENST00000622160 2253 ntBASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 PRKY-204ENST00000533551 1019 ntBASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
CFAP43Q8NDM7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 AC092865.7-201ENST00000641832 219 ntBASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
CFAP43Q8NDM7 AC133561.1-201ENST00000568600 2415 ntBASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC32.07■■■□□ 2.72
CFAP43Q8NDM7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
CFAP43Q8NDM7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC32.06■■■□□ 2.72
CFAP43Q8NDM7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CFAP43Q8NDM7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CFAP43Q8NDM7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC32.06■■■□□ 2.72
CFAP43Q8NDM7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
CFAP43Q8NDM7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC32.06■■■□□ 2.72
CFAP43Q8NDM7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC32.05■■■□□ 2.72
CFAP43Q8NDM7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms