Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 ARMC10P1-201ENST00000313754 855 ntBASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 KRT16P5-201ENST00000455284 522 ntBASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LINC00116Q8NCU8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 AL121829.2-201ENST00000620908 328 ntBASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
LINC00116Q8NCU8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 AC145285.6-201ENST00000604632 637 ntBASIC26.01■■□□□ 1.75
LINC00116Q8NCU8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26■■□□□ 1.75
LINC00116Q8NCU8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
LINC00116Q8NCU8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26■■□□□ 1.75
LINC00116Q8NCU8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26■■□□□ 1.75
LINC00116Q8NCU8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
LINC00116Q8NCU8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26■■□□□ 1.75
LINC00116Q8NCU8 AC079598.2-202ENST00000546624 1451 ntBASIC26■■□□□ 1.75
LINC00116Q8NCU8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
LINC00116Q8NCU8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26■■□□□ 1.75
LINC00116Q8NCU8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
LINC00116Q8NCU8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC26■■□□□ 1.75
LINC00116Q8NCU8 RBM17P1-201ENST00000453646 1190 ntBASIC26■■□□□ 1.75
LINC00116Q8NCU8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC26■■□□□ 1.75
LINC00116Q8NCU8 AC092865.7-201ENST00000641832 219 ntBASIC26■■□□□ 1.75
LINC00116Q8NCU8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26■■□□□ 1.75
LINC00116Q8NCU8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.99■■□□□ 1.75
LINC00116Q8NCU8 NBPF21P-201ENST00000425093 1451 ntBASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 AL049597.2-201ENST00000565575 961 ntBASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.98■■□□□ 1.75
LINC00116Q8NCU8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
LINC00116Q8NCU8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
LINC00116Q8NCU8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.97■■□□□ 1.75
LINC00116Q8NCU8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
LINC00116Q8NCU8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
LINC00116Q8NCU8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
LINC00116Q8NCU8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.97■■□□□ 1.75
LINC00116Q8NCU8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
LINC00116Q8NCU8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 AC005521.1-201ENST00000393351 872 ntBASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms