Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.3■■□□□ 1
LEMD2Q8NC56 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LEMD2Q8NC56 AC133681.1-201ENST00000465482 601 ntBASIC21.3■■□□□ 1
LEMD2Q8NC56 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.3■■□□□ 1
LEMD2Q8NC56 MTDHP1-201ENST00000605323 784 ntBASIC21.3■■□□□ 1
LEMD2Q8NC56 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LEMD2Q8NC56 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.3■■□□□ 1
LEMD2Q8NC56 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LEMD2Q8NC56 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
LEMD2Q8NC56 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.3■■□□□ 1
LEMD2Q8NC56 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LEMD2Q8NC56 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.29■■□□□ 1
LEMD2Q8NC56 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.29■■□□□ 1
LEMD2Q8NC56 MIR4497-201ENST00000583208 89 ntBASIC21.29■■□□□ 1
LEMD2Q8NC56 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LEMD2Q8NC56 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.29■■□□□ 1
LEMD2Q8NC56 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LEMD2Q8NC56 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LEMD2Q8NC56 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD2Q8NC56 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.28■■□□□ 1
LEMD2Q8NC56 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.28■■□□□ 1
LEMD2Q8NC56 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LEMD2Q8NC56 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.28■■□□□ 1
LEMD2Q8NC56 AC011484.1-201ENST00000377652 1995 ntBASIC21.28■■□□□ 1
LEMD2Q8NC56 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.28■■□□□ 1
LEMD2Q8NC56 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD2Q8NC56 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
LEMD2Q8NC56 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD2Q8NC56 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD2Q8NC56 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD2Q8NC56 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.27■■□□□ 1
LEMD2Q8NC56 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD2Q8NC56 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LEMD2Q8NC56 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.27■■□□□ 1
LEMD2Q8NC56 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.27■■□□□ 1
LEMD2Q8NC56 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
LEMD2Q8NC56 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.27■■□□□ 1
LEMD2Q8NC56 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD2Q8NC56 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.27■■□□□ 1
LEMD2Q8NC56 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD2Q8NC56 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.27■□□□□ 0.99
LEMD2Q8NC56 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LEMD2Q8NC56 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LEMD2Q8NC56 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LEMD2Q8NC56 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.27■□□□□ 0.99
LEMD2Q8NC56 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 AC012618.2-201ENST00000428058 849 ntBASIC21.26■□□□□ 0.99
LEMD2Q8NC56 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.26■□□□□ 0.99
LEMD2Q8NC56 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.25■□□□□ 0.99
LEMD2Q8NC56 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD2Q8NC56 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD2Q8NC56 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.25■□□□□ 0.99
LEMD2Q8NC56 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD2Q8NC56 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD2Q8NC56 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD2Q8NC56 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD2Q8NC56 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms