Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 FAM21FP-204ENST00000608637 956 ntBASIC23.05■■□□□ 1.28
RETREG2Q8NC44 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG2Q8NC44 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 KRT17P1-201ENST00000399211 1546 ntBASIC23.03■■□□□ 1.28
RETREG2Q8NC44 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 UBE2SP1-201ENST00000450587 669 ntBASIC23.03■■□□□ 1.28
RETREG2Q8NC44 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 AC100791.3-201ENST00000617619 330 ntBASIC23.03■■□□□ 1.28
RETREG2Q8NC44 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.03■■□□□ 1.28
RETREG2Q8NC44 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 CYP2T3P-201ENST00000601990 817 ntBASIC23.02■■□□□ 1.28
RETREG2Q8NC44 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
RETREG2Q8NC44 LINC01521-201ENST00000504184 1943 ntBASIC23.02■■□□□ 1.28
RETREG2Q8NC44 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 AC008550.1-201ENST00000511500 884 ntBASIC23.01■■□□□ 1.27
RETREG2Q8NC44 AC060766.5-201ENST00000590539 871 ntBASIC23.01■■□□□ 1.27
RETREG2Q8NC44 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG2Q8NC44 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
RETREG2Q8NC44 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23■■□□□ 1.27
RETREG2Q8NC44 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RETREG2Q8NC44 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23■■□□□ 1.27
RETREG2Q8NC44 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23■■□□□ 1.27
RETREG2Q8NC44 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23■■□□□ 1.27
RETREG2Q8NC44 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23■■□□□ 1.27
RETREG2Q8NC44 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RETREG2Q8NC44 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
RETREG2Q8NC44 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
RETREG2Q8NC44 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23■■□□□ 1.27
RETREG2Q8NC44 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23■■□□□ 1.27
RETREG2Q8NC44 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RETREG2Q8NC44 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RETREG2Q8NC44 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23■■□□□ 1.27
RETREG2Q8NC44 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 AL589743.5-201ENST00000616611 1050 ntBASIC22.99■■□□□ 1.27
RETREG2Q8NC44 HLA-B-256ENST00000639848 1089 ntBASIC22.99■■□□□ 1.27
RETREG2Q8NC44 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms