Protein–RNA interactions for Protein: Q8NA56

TTC29, Tetratricopeptide repeat protein 29, humanhuman

Predicted RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC29Q8NA56 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC29Q8NA56 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC29Q8NA56 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TTC29Q8NA56 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.68■□□□□ 0.74
TTC29Q8NA56 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TTC29Q8NA56 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC29Q8NA56 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC29Q8NA56 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC29Q8NA56 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TTC29Q8NA56 AC116050.2-201ENST00000612102 1779 ntBASIC19.67■□□□□ 0.74
TTC29Q8NA56 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC29Q8NA56 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC29Q8NA56 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TTC29Q8NA56 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
TTC29Q8NA56 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC29Q8NA56 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC29Q8NA56 AC142086.2-201ENST00000569753 217 ntBASIC19.67■□□□□ 0.74
TTC29Q8NA56 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC29Q8NA56 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC29Q8NA56 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC29Q8NA56 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC29Q8NA56 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TTC29Q8NA56 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC29Q8NA56 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC29Q8NA56 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.66■□□□□ 0.74
TTC29Q8NA56 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TTC29Q8NA56 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.66■□□□□ 0.74
TTC29Q8NA56 MIR4758-201ENST00000577688 71 ntBASIC19.66■□□□□ 0.74
TTC29Q8NA56 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TTC29Q8NA56 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TTC29Q8NA56 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TTC29Q8NA56 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 AC010980.2-201ENST00000587099 1412 ntBASIC19.66■□□□□ 0.74
TTC29Q8NA56 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC29Q8NA56 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 MIPEPP3-201ENST00000412105 444 ntBASIC19.65■□□□□ 0.74
TTC29Q8NA56 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 AL138781.1-201ENST00000566567 1274 ntBASIC19.65■□□□□ 0.74
TTC29Q8NA56 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 AC133041.1-202ENST00000642053 222 ntBASIC19.65■□□□□ 0.74
TTC29Q8NA56 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.65■□□□□ 0.74
TTC29Q8NA56 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC29Q8NA56 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TTC29Q8NA56 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TTC29Q8NA56 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TTC29Q8NA56 BX276092.2-201ENST00000417668 665 ntBASIC19.64■□□□□ 0.73
TTC29Q8NA56 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 AC100791.3-201ENST00000617619 330 ntBASIC19.64■□□□□ 0.73
TTC29Q8NA56 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TTC29Q8NA56 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC29Q8NA56 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.64■□□□□ 0.73
TTC29Q8NA56 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC29Q8NA56 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms