Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 AL390719.1-204ENST00000412397 1219 ntBASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 TSPY7P-201ENST00000431358 1114 ntBASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNPOQ8N3V7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.77■□□□□ 0.91
SYNPOQ8N3V7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SYNPOQ8N3V7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNPOQ8N3V7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 RARRES2P10-201ENST00000564312 460 ntBASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNPOQ8N3V7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
SYNPOQ8N3V7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 AC010331.1-201ENST00000611423 582 ntBASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPOQ8N3V7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms