Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL27A1Q8IZC6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 AL121829.2-201ENST00000620908 328 ntBASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 KRT8P9-201ENST00000558927 1449 ntBASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL27A1Q8IZC6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL27A1Q8IZC6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL27A1Q8IZC6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 AP001412.1-201ENST00000608405 714 ntBASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 PTBP1P-201ENST00000554374 1601 ntBASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 AL390719.1-204ENST00000412397 1219 ntBASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 KRT16P5-201ENST00000455284 522 ntBASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 AL121906.2-201ENST00000621597 723 ntBASIC19.35■□□□□ 0.69
COL27A1Q8IZC6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms