Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
SMC5Q8IY18 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMC5Q8IY18 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMC5Q8IY18 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
SMC5Q8IY18 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMC5Q8IY18 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.26■■□□□ 1.63
SMC5Q8IY18 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.26■■□□□ 1.63
SMC5Q8IY18 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.26■■□□□ 1.63
SMC5Q8IY18 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
SMC5Q8IY18 MFSD11-216ENST00000590393 1141 ntBASIC25.26■■□□□ 1.63
SMC5Q8IY18 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SMC5Q8IY18 AC016405.3-201ENST00000607710 860 ntBASIC25.26■■□□□ 1.63
SMC5Q8IY18 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.26■■□□□ 1.63
SMC5Q8IY18 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SMC5Q8IY18 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMC5Q8IY18 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMC5Q8IY18 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMC5Q8IY18 BID-204ENST00000399767 2129 ntTSL 2 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMC5Q8IY18 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMC5Q8IY18 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMC5Q8IY18 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 AC087633.2-202ENST00000565166 1439 ntBASIC25.25■■□□□ 1.63
SMC5Q8IY18 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMC5Q8IY18 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMC5Q8IY18 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMC5Q8IY18 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
SMC5Q8IY18 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMC5Q8IY18 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 KRT18P11-201ENST00000435214 1283 ntBASIC25.24■■□□□ 1.63
SMC5Q8IY18 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SMC5Q8IY18 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMC5Q8IY18 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMC5Q8IY18 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 CYP21A1P-202ENST00000354927 1481 ntBASIC25.23■■□□□ 1.63
SMC5Q8IY18 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 CNN2P6-201ENST00000439038 900 ntBASIC25.23■■□□□ 1.63
SMC5Q8IY18 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 AC013268.1-206ENST00000638368 961 ntBASIC25.23■■□□□ 1.63
SMC5Q8IY18 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 AC112229.1-201ENST00000639295 961 ntBASIC25.23■■□□□ 1.63
SMC5Q8IY18 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
SMC5Q8IY18 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMC5Q8IY18 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMC5Q8IY18 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMC5Q8IY18 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.22■■□□□ 1.63
SMC5Q8IY18 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SMC5Q8IY18 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMC5Q8IY18 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
SMC5Q8IY18 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMC5Q8IY18 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMC5Q8IY18 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
SMC5Q8IY18 AC006015.1-201ENST00000429970 570 ntBASIC25.22■■□□□ 1.63
SMC5Q8IY18 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC25.22■■□□□ 1.63
SMC5Q8IY18 DPP3P2-201ENST00000416030 1696 ntBASIC25.22■■□□□ 1.63
SMC5Q8IY18 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.22■■□□□ 1.63
SMC5Q8IY18 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMC5Q8IY18 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMC5Q8IY18 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMC5Q8IY18 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMC5Q8IY18 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMC5Q8IY18 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMC5Q8IY18 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms