Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 AC007225.1-201ENST00000566331 1836 ntBASIC19.05■□□□□ 0.64
CCDC71Q8IV32 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 ABHD17AP1-201ENST00000358206 933 ntBASIC19.05■□□□□ 0.64
CCDC71Q8IV32 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 AC007322.1-201ENST00000426983 750 ntBASIC19.05■□□□□ 0.64
CCDC71Q8IV32 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 AC005181.1-201ENST00000604782 1256 ntBASIC19.05■□□□□ 0.64
CCDC71Q8IV32 AL121832.2-201ENST00000610979 668 ntBASIC19.05■□□□□ 0.64
CCDC71Q8IV32 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 AL512408.1-201ENST00000569378 2000 ntBASIC19.05■□□□□ 0.64
CCDC71Q8IV32 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71Q8IV32 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 AC231657.2-201ENST00000624556 255 ntBASIC19.04■□□□□ 0.64
CCDC71Q8IV32 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71Q8IV32 AC055733.4-201ENST00000638462 1354 ntBASIC19.04■□□□□ 0.64
CCDC71Q8IV32 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 MYCNOS-205ENST00000641950 531 ntBASIC19.03■□□□□ 0.64
CCDC71Q8IV32 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 AP006587.3-201ENST00000525742 1516 ntBASIC19.03■□□□□ 0.64
CCDC71Q8IV32 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC71Q8IV32 AC121338.2-201ENST00000622535 1744 ntBASIC19.03■□□□□ 0.64
CCDC71Q8IV32 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCDC71Q8IV32 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC71Q8IV32 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC71Q8IV32 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC71Q8IV32 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 TSPY6P-201ENST00000448518 926 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms