Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
RTTNQ86VV8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTTNQ86VV8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTTNQ86VV8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTTNQ86VV8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.92■□□□□ 0.46
RTTNQ86VV8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTTNQ86VV8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTTNQ86VV8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RTTNQ86VV8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RTTNQ86VV8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTTNQ86VV8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RTTNQ86VV8 RPS2P52-201ENST00000469610 820 ntBASIC17.92■□□□□ 0.46
RTTNQ86VV8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RTTNQ86VV8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.92■□□□□ 0.46
RTTNQ86VV8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.92■□□□□ 0.46
RTTNQ86VV8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.92■□□□□ 0.46
RTTNQ86VV8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTTNQ86VV8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTTNQ86VV8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTTNQ86VV8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTTNQ86VV8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTTNQ86VV8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTTNQ86VV8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTTNQ86VV8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTTNQ86VV8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RTTNQ86VV8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RTTNQ86VV8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RTTNQ86VV8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.9■□□□□ 0.46
RTTNQ86VV8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 MIR1224-201ENST00000408193 85 ntBASIC17.9■□□□□ 0.46
RTTNQ86VV8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RTTNQ86VV8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RTTNQ86VV8 AC116050.2-201ENST00000612102 1779 ntBASIC17.9■□□□□ 0.46
RTTNQ86VV8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.9■□□□□ 0.46
RTTNQ86VV8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.9■□□□□ 0.46
RTTNQ86VV8 TERF1P5-201ENST00000477545 1207 ntBASIC17.9■□□□□ 0.46
RTTNQ86VV8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.9■□□□□ 0.46
RTTNQ86VV8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RTTNQ86VV8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTTNQ86VV8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RTTNQ86VV8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.89■□□□□ 0.45
RTTNQ86VV8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.89■□□□□ 0.45
RTTNQ86VV8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 GUSBP6-202ENST00000438529 1198 ntBASIC17.89■□□□□ 0.45
RTTNQ86VV8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 AC007322.4-201ENST00000509611 723 ntBASIC17.89■□□□□ 0.45
RTTNQ86VV8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RTTNQ86VV8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
RTTNQ86VV8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RTTNQ86VV8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTTNQ86VV8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.89■□□□□ 0.45
RTTNQ86VV8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 AC073210.2-201ENST00000430369 194 ntBASIC17.88■□□□□ 0.45
RTTNQ86VV8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms