Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 AC010141.2-201ENST00000452426 721 ntBASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 AC092667.1-201ENST00000434301 2586 ntBASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL55Q7Z7F7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 MIR638-201ENST00000385237 100 ntBASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
MRPL55Q7Z7F7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 AC123595.1-201ENST00000440769 1046 ntBASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.04□□□□□ -0.32
MRPL55Q7Z7F7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 AC020907.5-201ENST00000624372 1936 ntBASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms