Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 TSPY6P-201ENST00000448518 926 ntBASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 CYP2T3P-201ENST00000601990 817 ntBASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD3Q7Z3D4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
LYSMD3Q7Z3D4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LYSMD3Q7Z3D4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
LYSMD3Q7Z3D4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD3Q7Z3D4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 KRT17P1-201ENST00000399211 1546 ntBASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 KRT18P68-201ENST00000392293 1000 ntBASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 SLC29A4P1-201ENST00000398760 971 ntBASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 BX276092.2-201ENST00000417668 665 ntBASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 AL356652.1-201ENST00000615962 565 ntBASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.43■□□□□ 0.86
LYSMD3Q7Z3D4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms