Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP1BQ7LBR1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 AC068338.2-201ENST00000563278 1430 ntBASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 CDV3P1-201ENST00000471403 739 ntBASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 AC105036.2-201ENST00000569468 176 ntBASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP1BQ7LBR1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHMP1BQ7LBR1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 AL355802.2-201ENST00000402069 882 ntBASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 AC133552.2-202ENST00000575694 574 ntBASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 AC104771.1-201ENST00000603335 964 ntBASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 OR10C1-204ENST00000622521 1039 ntBASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms