Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 NQO1-207ENST00000569118 519 ntTSL 29.5□□□□□ -0.892e-8■■■□□ 17
LARP4Q71RC2 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.227e-12■■■□□ 17
LARP4Q71RC2 PPIH-206ENST00000461351 527 ntTSL 36.97□□□□□ -1.297e-12■■■□□ 17
LARP4Q71RC2 STARD7-204ENST00000479456 2949 ntTSL 26.24□□□□□ -1.412e-8■■■□□ 17
LARP4Q71RC2 MDK-208ENST00000481047 775 ntTSL 221.12■□□□□ 0.972e-11■■■□□ 17
LARP4Q71RC2 MDK-212ENST00000533952 477 ntAPPRIS ALT2 TSL 318.28■□□□□ 0.522e-11■■■□□ 17
LARP4Q71RC2 MDK-210ENST00000490240 603 ntTSL 1 (best)16.68■□□□□ 0.262e-11■■■□□ 17
LARP4Q71RC2 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.42e-6■■■□□ 16.9
LARP4Q71RC2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.442e-6■■■□□ 16.9
LARP4Q71RC2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.8■□□□□ 0.122e-7■■■□□ 16.9
LARP4Q71RC2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.79■□□□□ 0.122e-7■■■□□ 16.9
LARP4Q71RC2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.03■□□□□ -02e-7■■■□□ 16.9
LARP4Q71RC2 NDUFB2-214ENST00000479181 665 ntTSL 27.5□□□□□ -1.212e-7■■■□□ 16.9
LARP4Q71RC2 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.37□□□□□ -1.232e-7■■■□□ 16.9
LARP4Q71RC2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.88□□□□□ -1.632e-7■■■□□ 16.9
LARP4Q71RC2 PTRHD1-205ENST00000487316 1014 ntTSL 220.47■□□□□ 0.871e-6■■■□□ 16.9
LARP4Q71RC2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.161e-6■■■□□ 16.9
LARP4Q71RC2 PTRHD1-203ENST00000474668 624 ntTSL 211.48□□□□□ -0.571e-6■■■□□ 16.9
LARP4Q71RC2 PTRHD1-204ENST00000480190 865 ntTSL 211.08□□□□□ -0.641e-6■■■□□ 16.9
LARP4Q71RC2 PTRHD1-202ENST00000467797 424 ntTSL 32.22□□□□□ -2.051e-6■■■□□ 16.9
LARP4Q71RC2 TIMM8B-202ENST00000507614 741 ntTSL 315.43■□□□□ 0.062e-6■■■□□ 16.9
LARP4Q71RC2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.132e-6■■■□□ 16.9
LARP4Q71RC2 TIMM8B-203ENST00000509359 1155 ntTSL 1 (best)9.04□□□□□ -0.962e-6■■■□□ 16.9
LARP4Q71RC2 TIMM8B-204ENST00000541231 805 ntTSL 1 (best) BASIC9.04□□□□□ -0.962e-6■■■□□ 16.9
LARP4Q71RC2 PABPC1-205ENST00000518196 631 ntTSL 312.24□□□□□ -0.456e-47■■■□□ 16.9
LARP4Q71RC2 SNRNP25-207ENST00000493672 329 ntTSL 511.09□□□□□ -0.633e-8■■■□□ 16.9
LARP4Q71RC2 SNRNP25-204ENST00000417493 408 ntTSL 510.05□□□□□ -0.83e-8■■■□□ 16.9
LARP4Q71RC2 HSBP1-202ENST00000567382 889 ntTSL 222.43■■□□□ 1.181e-10■■■□□ 16.9
LARP4Q71RC2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.591e-6■■■□□ 16.9
LARP4Q71RC2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.221e-6■■■□□ 16.9
LARP4Q71RC2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.059e-32■■■□□ 16.9
LARP4Q71RC2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.52■□□□□ 0.241e-6■■■□□ 16.9
LARP4Q71RC2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.49■□□□□ 0.071e-6■■■□□ 16.9
LARP4Q71RC2 DANCR-202ENST00000425653 823 ntTSL 1 (best)15.49■□□□□ 0.071e-6■■■□□ 16.9
LARP4Q71RC2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.545e-8■■■□□ 16.8
LARP4Q71RC2 CD99-211ENST00000623253 573 ntTSL 1 (best)14.63□□□□□ -0.075e-7■■■□□ 16.8
LARP4Q71RC2 CLPTM1-205ENST00000586915 775 ntTSL 215.78■□□□□ 0.123e-7■■■□□ 16.8
LARP4Q71RC2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.84□□□□□ -0.033e-7■■■□□ 16.8
LARP4Q71RC2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.661e-51■■■□□ 16.8
LARP4Q71RC2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.421e-51■■■□□ 16.8
LARP4Q71RC2 RBP4-203ENST00000371469 814 ntTSL 5 BASIC11.86□□□□□ -0.511e-51■■■□□ 16.8
LARP4Q71RC2 RBP4-204ENST00000629763 838 ntTSL 5 BASIC9.71□□□□□ -0.861e-51■■■□□ 16.8
LARP4Q71RC2 ACSM3-215ENST00000614721 3311 ntTSL 1 (best)8.41□□□□□ -1.066e-7■■■□□ 16.8
LARP4Q71RC2 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.69□□□□□ -0.388e-7■■■□□ 16.8
LARP4Q71RC2 COX7C-204ENST00000510447 581 ntTSL 39.91□□□□□ -0.826e-13■■■□□ 16.8
LARP4Q71RC2 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.62e-6■■■□□ 16.8
LARP4Q71RC2 EMG1-206ENST00000607161 1087 ntAPPRIS P5 TSL 2 BASIC10.96□□□□□ -0.652e-6■■■□□ 16.8
LARP4Q71RC2 EMG1-205ENST00000261406 958 ntAPPRIS ALT2 TSL 59.93□□□□□ -0.822e-6■■■□□ 16.8
LARP4Q71RC2 EMG1-201ENST00000539196 616 ntTSL 26.12□□□□□ -1.432e-6■■■□□ 16.8
LARP4Q71RC2 LRPAP1-201ENST00000296325 1078 ntTSL 1 (best)15.74■□□□□ 0.113e-20■■■□□ 16.8
LARP4Q71RC2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.211e-323■■■□□ 16.8
LARP4Q71RC2 GRINA-206ENST00000530898 558 ntTSL 214.36□□□□□ -0.114e-10■■■□□ 16.8
LARP4Q71RC2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.67■■□□□ 1.544e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.8■■□□□ 1.244e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.14■■□□□ 1.134e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.124e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-215ENST00000450019 1689 ntTSL 521.88■■□□□ 1.094e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.48■■□□□ 1.034e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.71■□□□□ 0.914e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.7■□□□□ 0.94e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.01■□□□□ 0.794e-8■■■□□ 16.7
LARP4Q71RC2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.56■□□□□ 0.244e-8■■■□□ 16.7
LARP4Q71RC2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.244e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-203ENST00000399807 2241 ntTSL 515.55■□□□□ 0.084e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-226ENST00000490583 888 ntTSL 315.33■□□□□ 0.044e-8■■■□□ 16.7
LARP4Q71RC2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.024e-8■■■□□ 16.7
LARP4Q71RC2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.69□□□□□ -0.064e-8■■■□□ 16.7
LARP4Q71RC2 WDR60-204ENST00000454771 812 ntTSL 414.68□□□□□ -0.062e-6■■■□□ 16.7
LARP4Q71RC2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.67□□□□□ -0.064e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.24□□□□□ -0.134e-8■■■□□ 16.7
LARP4Q71RC2 C17orf99-202ENST00000451352 2404 ntTSL 214.22□□□□□ -0.134e-8■■■□□ 16.7
LARP4Q71RC2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.164e-8■■■□□ 16.7
LARP4Q71RC2 PTGES3-206ENST00000537473 2939 ntTSL 213.79□□□□□ -0.24e-8■■■□□ 16.7
LARP4Q71RC2 WDR60-203ENST00000444851 2769 ntTSL 1 (best)13.68□□□□□ -0.222e-6■■■□□ 16.7
LARP4Q71RC2 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.292e-6■■■□□ 16.7
LARP4Q71RC2 TANGO2-213ENST00000444651 847 ntTSL 312.92□□□□□ -0.344e-8■■■□□ 16.7
LARP4Q71RC2 C17orf99-204ENST00000586246 371 ntTSL 512.52□□□□□ -0.414e-8■■■□□ 16.7
LARP4Q71RC2 WDR60-205ENST00000467220 5410 ntTSL 212.26□□□□□ -0.452e-6■■■□□ 16.7
LARP4Q71RC2 C17orf99-203ENST00000586029 694 ntAPPRIS ALT2 TSL 311.99□□□□□ -0.494e-8■■■□□ 16.7
LARP4Q71RC2 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.514e-8■■■□□ 16.7
LARP4Q71RC2 TANGO2-221ENST00000476940 414 ntTSL 511.32□□□□□ -0.64e-8■■■□□ 16.7
LARP4Q71RC2 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.613e-14■■■□□ 16.7
LARP4Q71RC2 C17orf99-201ENST00000340363 984 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.664e-8■■■□□ 16.7
LARP4Q71RC2 ABCF1-202ENST00000376545 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.694e-8■■■□□ 16.7
LARP4Q71RC2 ABCF1-205ENST00000475993 2860 ntTSL 1 (best)10.52□□□□□ -0.734e-8■■■□□ 16.7
LARP4Q71RC2 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.814e-8■■■□□ 16.7
LARP4Q71RC2 ABCF1-203ENST00000441867 1074 ntTSL 58.47□□□□□ -1.054e-8■■■□□ 16.7
LARP4Q71RC2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.29■□□□□ 0.042e-7■■■□□ 16.7
LARP4Q71RC2 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.81□□□□□ -0.22e-7■■■□□ 16.7
LARP4Q71RC2 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.262e-7■■■□□ 16.7
LARP4Q71RC2 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.372e-7■■■□□ 16.7
LARP4Q71RC2 PCGF2-201ENST00000610747 459 ntTSL 212.64□□□□□ -0.392e-7■■■□□ 16.7
LARP4Q71RC2 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.562e-7■■■□□ 16.7
LARP4Q71RC2 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC11.15□□□□□ -0.622e-7■■■□□ 16.7
LARP4Q71RC2 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC11.62□□□□□ -0.552e-16■■■□□ 16.7
LARP4Q71RC2 CKB-203ENST00000553610 542 ntTSL 315.94■□□□□ 0.144e-7■■■□□ 16.7
LARP4Q71RC2 ATP5I-205ENST00000515202 393 ntTSL 26.38□□□□□ -1.391e-8■■■□□ 16.7
LARP4Q71RC2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.642e-7■■■□□ 16.7
LARP4Q71RC2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.472e-7■■■□□ 16.7
LARP4Q71RC2 EIF3B-210ENST00000468611 1868 ntTSL 214.47□□□□□ -0.092e-7■■■□□ 16.7
Retrieved 100 of 15,922 protein–RNA pairs in 272.8 ms