Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 KRT18P21-201ENST00000515767 1272 ntBASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 AC124016.1-201ENST00000609552 612 ntBASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 AL023875.1-201ENST00000640777 796 ntBASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC149Q6ZUS6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 AC133681.1-201ENST00000465482 601 ntBASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 AL049637.2-201ENST00000641778 930 ntBASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 AL135905.2-201ENST00000584934 1404 ntBASIC21.46■■□□□ 1.03
CCDC149Q6ZUS6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC149Q6ZUS6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 MIR4785-201ENST00000585005 73 ntBASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 AC006557.6-201ENST00000623071 864 ntBASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 AC011484.1-201ENST00000377652 1995 ntBASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC149Q6ZUS6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC149Q6ZUS6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms