Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 LSM12P1-201ENST00000411836 588 ntBASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
RFWD3Q6PCD5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.99
RFWD3Q6PCD5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 DUSP5P2-201ENST00000426873 1033 ntBASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 KRT18P6-201ENST00000555540 1265 ntBASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
RFWD3Q6PCD5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 KRT18P68-201ENST00000392293 1000 ntBASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 AC011484.1-201ENST00000377652 1995 ntBASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFWD3Q6PCD5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 AC091874.3-201ENST00000512672 1195 ntBASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 CD99P1-205ENST00000527459 561 ntBASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 AC083880.1-201ENST00000608266 535 ntBASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD3Q6PCD5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 MYC-209ENST00000641252 345 ntBASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD3Q6PCD5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms