Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H3F3CQ6NXT2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
H3F3CQ6NXT2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.83■□□□□ 0.61
H3F3CQ6NXT2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H3F3CQ6NXT2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.83■□□□□ 0.61
H3F3CQ6NXT2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3CQ6NXT2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 AL049796.1-201ENST00000565336 1766 ntBASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3CQ6NXT2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 AC027702.1-201ENST00000563810 1770 ntBASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 AC098590.1-201ENST00000468126 897 ntBASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 AC073648.6-201ENST00000641589 218 ntBASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3CQ6NXT2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 GCSHP5-201ENST00000443090 522 ntBASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3CQ6NXT2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3CQ6NXT2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
H3F3CQ6NXT2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3CQ6NXT2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3CQ6NXT2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
H3F3CQ6NXT2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3CQ6NXT2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.79■□□□□ 0.6
H3F3CQ6NXT2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3CQ6NXT2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3CQ6NXT2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms