Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LGSNQ5TDP6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.49■□□□□ 0.87
LGSNQ5TDP6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.49■□□□□ 0.87
LGSNQ5TDP6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 AP001330.3-201ENST00000520123 633 ntBASIC20.48■□□□□ 0.87
LGSNQ5TDP6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 TCF3P1-201ENST00000423021 1937 ntBASIC20.48■□□□□ 0.87
LGSNQ5TDP6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LGSNQ5TDP6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 AC008406.3-201ENST00000620001 1374 ntBASIC20.47■□□□□ 0.87
LGSNQ5TDP6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 AC096631.2-201ENST00000436136 790 ntBASIC20.47■□□□□ 0.87
LGSNQ5TDP6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 RARRES2P11-201ENST00000635158 484 ntBASIC20.47■□□□□ 0.87
LGSNQ5TDP6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGSNQ5TDP6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 AC091305.1-201ENST00000479476 895 ntBASIC20.46■□□□□ 0.87
LGSNQ5TDP6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 MIR2861-201ENST00000636310 90 ntBASIC20.46■□□□□ 0.87
LGSNQ5TDP6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGSNQ5TDP6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.45■□□□□ 0.87
LGSNQ5TDP6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 KRT87P-202ENST00000534226 1464 ntBASIC20.45■□□□□ 0.86
LGSNQ5TDP6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 AC116050.2-201ENST00000612102 1779 ntBASIC20.45■□□□□ 0.86
LGSNQ5TDP6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGSNQ5TDP6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.44■□□□□ 0.86
LGSNQ5TDP6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LGSNQ5TDP6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LGSNQ5TDP6 AC079140.4-201ENST00000507448 529 ntBASIC20.44■□□□□ 0.86
LGSNQ5TDP6 TPRG1LP1-201ENST00000598702 760 ntBASIC20.44■□□□□ 0.86
LGSNQ5TDP6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LGSNQ5TDP6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LGSNQ5TDP6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
LGSNQ5TDP6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms