Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC087289.5-201ENST00000586076 3175 ntBASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 KRT18P5-201ENST00000436075 1291 ntBASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 AC104187.1-201ENST00000607510 612 ntBASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF1Q5TC12 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 POU5F1P4-201ENST00000413175 1085 ntBASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 AC010141.2-201ENST00000452426 721 ntBASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATPAF1Q5TC12 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 AL162430.1-201ENST00000480705 870 ntBASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 KRT18P20-201ENST00000548986 1279 ntBASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 KRT18P61-201ENST00000585825 1298 ntBASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 AP001160.3-201ENST00000601484 763 ntBASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 AC008175.2-201ENST00000612840 297 ntBASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 AC020907.5-201ENST00000624372 1936 ntBASIC17.59■□□□□ 0.41
ATPAF1Q5TC12 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ATPAF1Q5TC12 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms