Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGO1Q5FBB7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.76■□□□□ 0.75
SGO1Q5FBB7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SGO1Q5FBB7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.76■□□□□ 0.75
SGO1Q5FBB7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGO1Q5FBB7 AL512408.1-201ENST00000569378 2000 ntBASIC19.76■□□□□ 0.75
SGO1Q5FBB7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGO1Q5FBB7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGO1Q5FBB7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGO1Q5FBB7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGO1Q5FBB7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 AC112907.3-201ENST00000577781 2400 ntBASIC19.75■□□□□ 0.75
SGO1Q5FBB7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 NTF6G-201ENST00000591094 616 ntBASIC19.75■□□□□ 0.75
SGO1Q5FBB7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 UBE2DNL-204ENST00000602536 740 ntBASIC19.75■□□□□ 0.75
SGO1Q5FBB7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 RBM17P2-201ENST00000616397 1405 ntBASIC19.75■□□□□ 0.75
SGO1Q5FBB7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGO1Q5FBB7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 AC019069.1-201ENST00000610008 1333 ntBASIC19.74■□□□□ 0.75
SGO1Q5FBB7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
SGO1Q5FBB7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SGO1Q5FBB7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 AC092720.2-201ENST00000602388 1665 ntBASIC19.72■□□□□ 0.75
SGO1Q5FBB7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 AC091799.1-201ENST00000422823 811 ntBASIC19.72■□□□□ 0.75
SGO1Q5FBB7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 AC087623.3-201ENST00000607047 1098 ntBASIC19.72■□□□□ 0.75
SGO1Q5FBB7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
SGO1Q5FBB7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SGO1Q5FBB7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms