Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO4Q2I0M5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RSPO4Q2I0M5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO4Q2I0M5 NBPF21P-201ENST00000425093 1451 ntBASIC19.86■□□□□ 0.77
RSPO4Q2I0M5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.86■□□□□ 0.77
RSPO4Q2I0M5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 AP002982.1-201ENST00000492365 877 ntBASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 AC063952.2-201ENST00000498792 1227 ntBASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RSPO4Q2I0M5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 C9orf163-202ENST00000624034 2573 ntBASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 AP000550.4-202ENST00000639755 178 ntBASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RSPO4Q2I0M5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RSPO4Q2I0M5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.83■□□□□ 0.77
RSPO4Q2I0M5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.83■□□□□ 0.77
RSPO4Q2I0M5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.83■□□□□ 0.77
RSPO4Q2I0M5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RSPO4Q2I0M5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RSPO4Q2I0M5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.83■□□□□ 0.77
RSPO4Q2I0M5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.83■□□□□ 0.77
RSPO4Q2I0M5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.83■□□□□ 0.77
RSPO4Q2I0M5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RSPO4Q2I0M5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.83■□□□□ 0.76
RSPO4Q2I0M5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.83■□□□□ 0.76
RSPO4Q2I0M5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RSPO4Q2I0M5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 AL031133.1-201ENST00000406807 723 ntBASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RSPO4Q2I0M5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 BX664615.1-201ENST00000443558 458 ntBASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 AL121829.2-201ENST00000620908 328 ntBASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO4Q2I0M5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 AC116562.2-201ENST00000507042 360 ntBASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms