Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 LINC00969-267ENST00000626178 342 ntTSL 55.53□□□□□ -1.523e-8■■■□□ 14.6
LSM11P83369 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.59□□□□□ -1.673e-8■■■□□ 14.6
LSM11P83369 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.067e-10■■□□□ 14.5
LSM11P83369 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.266e-10■■□□□ 14.5
LSM11P83369 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.45■□□□□ 0.226e-10■■□□□ 14.5
LSM11P83369 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12□□□□□ -0.495e-9■■□□□ 14.5
LSM11P83369 ACAD11-201ENST00000264990 4142 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.725e-9■■□□□ 14.5
LSM11P83369 ACAD11-208ENST00000496418 3684 ntTSL 25.7□□□□□ -1.55e-9■■□□□ 14.5
LSM11P83369 SPATA20-225ENST00000515619 818 ntTSL 514.36□□□□□ -0.112e-10■■□□□ 14.5
LSM11P83369 ATN1-203ENST00000537488 899 ntTSL 214.26□□□□□ -0.133e-7■■□□□ 14.5
LSM11P83369 DDX56-210ENST00000479440 599 ntTSL 214.25□□□□□ -0.132e-10■■□□□ 14.5
LSM11P83369 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.48□□□□□ -0.413e-7■■□□□ 14.5
LSM11P83369 PHKG2-210ENST00000569684 1134 ntTSL 511.64□□□□□ -0.553e-7■■□□□ 14.5
LSM11P83369 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC8.72□□□□□ -1.013e-7■■□□□ 14.5
LSM11P83369 PHKG2-203ENST00000561712 621 ntTSL 37.69□□□□□ -1.183e-7■■□□□ 14.5
LSM11P83369 TTLL3-210ENST00000427220 3233 ntTSL 1 (best)18.76■□□□□ 0.592e-7■■□□□ 14.5
LSM11P83369 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.412e-7■■□□□ 14.5
LSM11P83369 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.83□□□□□ -0.032e-7■■□□□ 14.5
LSM11P83369 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.262e-7■■□□□ 14.5
LSM11P83369 TTLL3-215ENST00000438141 1743 ntTSL 212.18□□□□□ -0.462e-7■■□□□ 14.5
LSM11P83369 TTLL3-211ENST00000430390 1674 ntTSL 1 (best)10.92□□□□□ -0.662e-7■■□□□ 14.5
LSM11P83369 TTLL3-202ENST00000383827 4834 ntTSL 1 (best) BASIC9.85□□□□□ -0.832e-7■■□□□ 14.5
LSM11P83369 TTLL3-221ENST00000455274 2848 ntTSL 2 BASIC9.6□□□□□ -0.872e-7■■□□□ 14.5
LSM11P83369 TTLL3-225ENST00000473661 3811 ntTSL 59.54□□□□□ -0.882e-7■■□□□ 14.5
LSM11P83369 TTLL3-232ENST00000496526 5282 ntTSL 29.54□□□□□ -0.882e-7■■□□□ 14.5
LSM11P83369 TTLL3-228ENST00000483051 4176 ntTSL 57.96□□□□□ -1.132e-7■■□□□ 14.5
LSM11P83369 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.13□□□□□ -1.274e-8■■□□□ 14.5
LSM11P83369 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.552e-7■■□□□ 14.5
LSM11P83369 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.482e-7■■□□□ 14.5
LSM11P83369 FAM207A-203ENST00000458015 643 ntTSL 517.56■□□□□ 0.42e-7■■□□□ 14.5
LSM11P83369 RANBP1-214ENST00000488484 699 ntTSL 213.38□□□□□ -0.273e-11■■□□□ 14.5
LSM11P83369 RANBP1-209ENST00000432879 744 ntTSL 312.85□□□□□ -0.353e-11■■□□□ 14.5
LSM11P83369 RANBP1-212ENST00000467920 529 ntTSL 29.96□□□□□ -0.823e-11■■□□□ 14.5
LSM11P83369 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.158e-7■■□□□ 14.5
LSM11P83369 IQGAP3-203ENST00000491900 5294 ntTSL 1 (best)10.69□□□□□ -0.73e-9■■□□□ 14.5
LSM11P83369 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.763e-9■■□□□ 14.5
LSM11P83369 SF3B1-209ENST00000479532 587 ntTSL 210.94□□□□□ -0.664e-12■■□□□ 14.5
LSM11P83369 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.293e-7■■□□□ 14.5
LSM11P83369 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.022e-7■■□□□ 14.5
LSM11P83369 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.853e-6■■□□□ 14.5
LSM11P83369 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.84e-8■■□□□ 14.5
LSM11P83369 DDX56-202ENST00000415758 1287 ntTSL 513.54□□□□□ -0.242e-6■■□□□ 14.5
LSM11P83369 STK36-209ENST00000462031 582 ntTSL 211.17□□□□□ -0.623e-6■■□□□ 14.5
LSM11P83369 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.846e-6■■□□□ 14.5
LSM11P83369 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.826e-6■■□□□ 14.5
LSM11P83369 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.746e-6■■□□□ 14.5
LSM11P83369 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.57■□□□□ 0.726e-6■■□□□ 14.5
LSM11P83369 ST20-MTHFS-202ENST00000494999 632 ntTSL 319.21■□□□□ 0.676e-6■■□□□ 14.5
LSM11P83369 PTP4A3-205ENST00000523147 558 ntTSL 518.1■□□□□ 0.496e-6■■□□□ 14.5
LSM11P83369 NUP58-203ENST00000381747 1659 ntTSL 517.39■□□□□ 0.379e-11■■□□□ 14.5
LSM11P83369 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.26■□□□□ 0.356e-6■■□□□ 14.5
LSM11P83369 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.246e-6■■□□□ 14.5
LSM11P83369 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.236e-6■■□□□ 14.5
LSM11P83369 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.226e-6■■□□□ 14.5
LSM11P83369 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.226e-6■■□□□ 14.5
LSM11P83369 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.32■□□□□ 0.26e-6■■□□□ 14.5
LSM11P83369 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.196e-6■■□□□ 14.5
LSM11P83369 NUP58-209ENST00000476553 564 ntTSL 416.2■□□□□ 0.189e-11■■□□□ 14.5
LSM11P83369 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.188e-8■■□□□ 14.5
LSM11P83369 USP10-210ENST00000563892 570 ntTSL 315.97■□□□□ 0.156e-6■■□□□ 14.5
LSM11P83369 NUP58-208ENST00000466694 1854 ntTSL 515.8■□□□□ 0.129e-11■■□□□ 14.5
LSM11P83369 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.086e-6■■□□□ 14.5
LSM11P83369 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.019e-11■■□□□ 14.5
LSM11P83369 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.056e-6■■□□□ 14.5
LSM11P83369 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.116e-6■■□□□ 14.5
LSM11P83369 LUC7L3-204ENST00000503798 663 ntTSL 314.35□□□□□ -0.111e-7■■□□□ 14.5
LSM11P83369 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC14.3□□□□□ -0.126e-6■■□□□ 14.5
LSM11P83369 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.156e-6■■□□□ 14.5
LSM11P83369 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.166e-6■■□□□ 14.5
LSM11P83369 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.186e-6■■□□□ 14.5
LSM11P83369 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.26e-6■■□□□ 14.5
LSM11P83369 ARFGAP3-205ENST00000454099 542 ntTSL 413.66□□□□□ -0.226e-6■■□□□ 14.5
LSM11P83369 PIGC-206ENST00000484368 1661 ntTSL 1 (best)13.22□□□□□ -0.296e-6■■□□□ 14.5
LSM11P83369 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.73□□□□□ -0.376e-6■■□□□ 14.5
LSM11P83369 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.436e-6■■□□□ 14.5
LSM11P83369 ABL1-203ENST00000393293 532 ntTSL 512.1□□□□□ -0.477e-9■■□□□ 14.5
LSM11P83369 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.56e-6■■□□□ 14.5
LSM11P83369 USP10-202ENST00000540269 3070 ntTSL 1 (best)11.75□□□□□ -0.532e-6■■□□□ 14.5
LSM11P83369 AC098617.1-201ENST00000424116 500 ntTSL 211.57□□□□□ -0.566e-6■■□□□ 14.5
LSM11P83369 WDR27-211ENST00000546525 3511 ntTSL 1 (best)11.56□□□□□ -0.566e-6■■□□□ 14.5
LSM11P83369 RPL10-212ENST00000479366 569 ntTSL 411.45□□□□□ -0.586e-6■■□□□ 14.5
LSM11P83369 AC098617.1-202ENST00000428980 1207 ntTSL 5 BASIC11.4□□□□□ -0.586e-6■■□□□ 14.5
LSM11P83369 PARPBP-208ENST00000535811 1465 ntTSL 211.26□□□□□ -0.616e-6■■□□□ 14.5
LSM11P83369 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.2□□□□□ -0.629e-11■■□□□ 14.5
LSM11P83369 USP10-215ENST00000569038 730 ntTSL 311.1□□□□□ -0.636e-6■■□□□ 14.5
LSM11P83369 ARFGAP3-203ENST00000437119 1650 ntTSL 1 (best) BASIC10.97□□□□□ -0.656e-6■■□□□ 14.5
LSM11P83369 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.667e-9■■□□□ 14.5
LSM11P83369 PARPBP-210ENST00000541394 2452 ntTSL 2 BASIC10.85□□□□□ -0.676e-6■■□□□ 14.5
LSM11P83369 USP10-218ENST00000570053 502 ntTSL 310.81□□□□□ -0.686e-6■■□□□ 14.5
LSM11P83369 USP10-219ENST00000570191 2717 ntTSL 2 BASIC10.74□□□□□ -0.696e-6■■□□□ 14.5
LSM11P83369 LUC7L3-203ENST00000503728 783 ntTSL 510.71□□□□□ -0.699e-8■■□□□ 14.5
LSM11P83369 CRY1-203ENST00000549356 621 ntTSL 310.6□□□□□ -0.716e-6■■□□□ 14.5
LSM11P83369 WDR27-209ENST00000486490 492 ntTSL 510.46□□□□□ -0.736e-6■■□□□ 14.5
LSM11P83369 ARFGAP3-204ENST00000453516 817 ntTSL 310.45□□□□□ -0.746e-6■■□□□ 14.5
LSM11P83369 USP10-207ENST00000563048 1315 ntTSL 210.35□□□□□ -0.756e-6■■□□□ 14.5
LSM11P83369 NUP58-202ENST00000381736 4332 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.779e-11■■□□□ 14.5
LSM11P83369 PHKB-217ENST00000570047 797 ntTSL 39.9□□□□□ -0.826e-6■■□□□ 14.5
LSM11P83369 PHKB-214ENST00000567402 1617 ntTSL 1 (best)9.74□□□□□ -0.856e-6■■□□□ 14.5
LSM11P83369 RAD54L2-203ENST00000461680 5129 ntTSL 29.57□□□□□ -0.886e-6■■□□□ 14.5
LSM11P83369 NUP58-204ENST00000394327 1408 ntTSL 59.14□□□□□ -0.959e-11■■□□□ 14.5
Retrieved 100 of 11,495 protein–RNA pairs in 74.9 ms