RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 AEBP2Q6ZN18 517 aaPredicted RBP38.16■■■■□ 3.7
NUP58-209ENST00000476553 CHIC1Q5VXU3 224 aa35.92■■■■□ 3.34
NUP58-209ENST00000476553 SENP3Q9H4L4 574 aaPredicted RBP32.58■■■□□ 2.81
NUP58-209ENST00000476553 PHF23Q9BUL5 403 aaPredicted RBP32.07■■■□□ 2.72
NUP58-209ENST00000476553 FOXD1Q16676 465 aa30.39■■■□□ 2.46
NUP58-209ENST00000476553 MSH5O43196 834 aa28.57■■■□□ 2.16
NUP58-209ENST00000476553 PLPPR3Q6T4P5 718 aa28.53■■■□□ 2.16
NUP58-209ENST00000476553 POTEDQ86YR6 584 aa28.43■■■□□ 2.14
NUP58-209ENST00000476553 PIAS4Q8N2W9 510 aaPredicted RBP28.3■■■□□ 2.12
NUP58-209ENST00000476553 PPP6R1Q9UPN7 881 aa28.17■■■□□ 2.1
NUP58-209ENST00000476553 ADRA2BP18089 450 aa28.02■■■□□ 2.08
NUP58-209ENST00000476553 MAPK8IP2Q13387 824 aaPredicted RBP25.83■■□□□ 1.73
NUP58-209ENST00000476553 DMRT2Q9Y5R5 561 aa25.8■■□□□ 1.72
NUP58-209ENST00000476553 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
NUP58-209ENST00000476553 PPP4R3CPQ6ZMV5 832 aa24.94■■□□□ 1.58
NUP58-209ENST00000476553 HOXD11P31277 338 aaPredicted RBP24.74■■□□□ 1.55
NUP58-209ENST00000476553 CACNB1Q02641 598 aaPredicted RBP24.64■■□□□ 1.54
NUP58-209ENST00000476553 DCAF8L1A6NGE4 600 aa24.62■■□□□ 1.53
NUP58-209ENST00000476553 CNKSR2Q8WXI2 1034 aa24.57■■□□□ 1.52
NUP58-209ENST00000476553 RNF216Q9NWF9 866 aaPredicted RBP24.45■■□□□ 1.5
NUP58-209ENST00000476553 RNF39Q9H2S5 420 aa24.38■■□□□ 1.49
NUP58-209ENST00000476553 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
NUP58-209ENST00000476553 C1QBPQ07021 282 aaKnown RBP23.98■■□□□ 1.43
NUP58-209ENST00000476553 NCBP3Q53F19 620 aaKnown RBP23.86■■□□□ 1.41
NUP58-209ENST00000476553 NPM3O75607 178 aaKnown RBP23.57■■□□□ 1.36
NUP58-209ENST00000476553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.47■■□□□ 1.35
NUP58-209ENST00000476553 U3KPZ7 1027 aaPredicted RBP23.03■■□□□ 1.28
NUP58-209ENST00000476553 KCNA4P22459 653 aa22.82■■□□□ 1.24
NUP58-209ENST00000476553 SPINK5Q9NQ38 1064 aaPredicted RBP22.76■■□□□ 1.23
NUP58-209ENST00000476553 DSG3P32926 999 aa22.7■■□□□ 1.22
NUP58-209ENST00000476553 CAPN15O75808 1086 aa22.67■■□□□ 1.22
NUP58-209ENST00000476553 SLC4A2P04920 1241 aa22.61■■□□□ 1.21
NUP58-209ENST00000476553 APLP2Q06481 763 aa22.3■■□□□ 1.16
NUP58-209ENST00000476553 ZNF219Q9P2Y4 722 aaPredicted RBP22.25■■□□□ 1.15
NUP58-209ENST00000476553 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
NUP58-209ENST00000476553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
NUP58-209ENST00000476553 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
NUP58-209ENST00000476553 POTEHQ6S545 545 aa22.2■■□□□ 1.14
NUP58-209ENST00000476553 ABCB7O75027 752 aa22.14■■□□□ 1.13
NUP58-209ENST00000476553 SAMD1Q6SPF0 538 aaPredicted RBP22.09■■□□□ 1.13
NUP58-209ENST00000476553 MYCNP04198 464 aaPredicted RBP21.81■■□□□ 1.08
NUP58-209ENST00000476553 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
NUP58-209ENST00000476553 POLA2Q14181 598 aa21.58■■□□□ 1.05
NUP58-209ENST00000476553 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
NUP58-209ENST00000476553 FOXD4L1Q9NU39 408 aa21.42■■□□□ 1.02
NUP58-209ENST00000476553 ATF5Q9Y2D1 282 aaPredicted RBP21.32■■□□□ 1
NUP58-209ENST00000476553 CHRDL2Q6WN34 429 aa21.3■■□□□ 1
NUP58-209ENST00000476553 ZBTB12Q9Y330 459 aaPredicted RBP21.17■□□□□ 0.98
NUP58-209ENST00000476553 AKT1S1Q96B36 256 aa21.09■□□□□ 0.97
NUP58-209ENST00000476553 ZBTB22O15209 634 aa21.02■□□□□ 0.96
NUP58-209ENST00000476553 OSCARQ8IYS5 282 aa20.97■□□□□ 0.95
NUP58-209ENST00000476553 REM2Q8IYK8 340 aaPredicted RBP20.88■□□□□ 0.93
NUP58-209ENST00000476553 ATXN8OSP0DMR3 200 aa20.8■□□□□ 0.92
NUP58-209ENST00000476553 PIP4P2Q8N4L2 257 aa20.73■□□□□ 0.91
NUP58-209ENST00000476553 PITPNM1O00562 1244 aa20.68■□□□□ 0.9
NUP58-209ENST00000476553 SP7Q8TDD2 431 aaPredicted RBP20.67■□□□□ 0.9
NUP58-209ENST00000476553 FXR2P51116 673 aaKnown RBP eCLIP20.58■□□□□ 0.89
NUP58-209ENST00000476553 SPDYE2BA6NHP3 402 aa20.5■□□□□ 0.87
NUP58-209ENST00000476553 SPDYE6P0CI01 402 aa20.5■□□□□ 0.87
NUP58-209ENST00000476553 SPDYE2Q495Y8 402 aa20.5■□□□□ 0.87
NUP58-209ENST00000476553 FBLN2P98095 1184 aa20.47■□□□□ 0.87
NUP58-209ENST00000476553 HAX1O00165 279 aa20.37■□□□□ 0.85
NUP58-209ENST00000476553 MKRN4PQ13434 485 aaPredicted RBP20.35■□□□□ 0.85
NUP58-209ENST00000476553 SSUH2Q9Y2M2 353 aa20.24■□□□□ 0.83
NUP58-209ENST00000476553 SPDYE1Q8NFV5 336 aaPredicted RBP20.19■□□□□ 0.82
NUP58-209ENST00000476553 EVX2Q03828 476 aa20.15■□□□□ 0.82
NUP58-209ENST00000476553 ZNF692Q9BU19 519 aaPredicted RBP20.13■□□□□ 0.81
NUP58-209ENST00000476553 PRKAR2AP13861 404 aaKnown RBP20.1■□□□□ 0.81
NUP58-209ENST00000476553 CLEC11AQ9Y240 323 aa20.1■□□□□ 0.81
NUP58-209ENST00000476553 C19orf67A6NJJ6 358 aa19.93■□□□□ 0.78
NUP58-209ENST00000476553 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
NUP58-209ENST00000476553 CHADLQ6NUI6 762 aa19.8■□□□□ 0.76
NUP58-209ENST00000476553 PRR29P0C7W0 189 aa19.75■□□□□ 0.75
NUP58-209ENST00000476553 CSRNP3Q8WYN3 585 aa19.72■□□□□ 0.75
NUP58-209ENST00000476553 GABBR2O75899 941 aa19.68■□□□□ 0.74
NUP58-209ENST00000476553 FARP1Q9Y4F1 1045 aaPredicted RBP19.5■□□□□ 0.71
NUP58-209ENST00000476553 CD44P16070 742 aaKnown RBP19.46■□□□□ 0.71
NUP58-209ENST00000476553 LHX8Q68G74 356 aa19.35■□□□□ 0.69
NUP58-209ENST00000476553 POTEIP0CG38 1075 aa19.3■□□□□ 0.68
NUP58-209ENST00000476553 CLCN6P51797 869 aa19.28■□□□□ 0.68
NUP58-209ENST00000476553 CREBZFQ9NS37 354 aa19.25■□□□□ 0.67
NUP58-209ENST00000476553 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
NUP58-209ENST00000476553 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
NUP58-209ENST00000476553 ZNF579Q8NAF0 562 aaKnown RBP19.2■□□□□ 0.66
NUP58-209ENST00000476553 SPDYE4A6NLX3 237 aa19.17■□□□□ 0.66
NUP58-209ENST00000476553 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
NUP58-209ENST00000476553 DCBLD2Q96PD2 775 aa19.03■□□□□ 0.64
NUP58-209ENST00000476553 GALR2O43603 387 aaPredicted RBP18.95■□□□□ 0.62
NUP58-209ENST00000476553 MNX1P50219 401 aaPredicted RBP18.92■□□□□ 0.62
NUP58-209ENST00000476553 PAK3O75914 559 aaPredicted RBP18.87■□□□□ 0.61
NUP58-209ENST00000476553 PHF12Q96QT6 1004 aa18.85■□□□□ 0.61
NUP58-209ENST00000476553 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.6
NUP58-209ENST00000476553 PROM2Q8N271 834 aa18.78■□□□□ 0.6
NUP58-209ENST00000476553 POTEB2H3BUK9 544 aa18.64■□□□□ 0.57
NUP58-209ENST00000476553 OTUD5Q96G74 571 aa18.63■□□□□ 0.57
NUP58-209ENST00000476553 PELP1Q8IZL8 1130 aaKnown RBP18.61■□□□□ 0.57
NUP58-209ENST00000476553 MS4A3Q96HJ5 214 aa18.61■□□□□ 0.57
NUP58-209ENST00000476553 ASTLQ6HA08 431 aaPredicted RBP18.57■□□□□ 0.56
NUP58-209ENST00000476553 ATMINO43313 823 aaPredicted RBP18.5■□□□□ 0.55
NUP58-209ENST00000476553 CCDC61Q9Y6R9 512 aa18.49■□□□□ 0.55
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