Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
GABREP78334 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABREP78334 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABREP78334 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.43■□□□□ 0.7
GABREP78334 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GABREP78334 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABREP78334 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.43■□□□□ 0.7
GABREP78334 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABREP78334 RCN1P1-201ENST00000400413 996 ntBASIC19.43■□□□□ 0.7
GABREP78334 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABREP78334 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GABREP78334 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.43■□□□□ 0.7
GABREP78334 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GABREP78334 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
GABREP78334 AC097493.4-201ENST00000641197 219 ntBASIC19.43■□□□□ 0.7
GABREP78334 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABREP78334 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABREP78334 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.43■□□□□ 0.7
GABREP78334 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.43■□□□□ 0.7
GABREP78334 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABREP78334 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABREP78334 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABREP78334 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABREP78334 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.42■□□□□ 0.7
GABREP78334 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABREP78334 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
GABREP78334 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABREP78334 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.42■□□□□ 0.7
GABREP78334 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.42■□□□□ 0.7
GABREP78334 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.42■□□□□ 0.7
GABREP78334 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABREP78334 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABREP78334 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GABREP78334 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.41■□□□□ 0.7
GABREP78334 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GABREP78334 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.41■□□□□ 0.7
GABREP78334 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.41■□□□□ 0.7
GABREP78334 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.41■□□□□ 0.7
GABREP78334 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.41■□□□□ 0.7
GABREP78334 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.41■□□□□ 0.7
GABREP78334 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.41■□□□□ 0.7
GABREP78334 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.41■□□□□ 0.7
GABREP78334 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.41■□□□□ 0.7
GABREP78334 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
GABREP78334 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 AC127496.7-201ENST00000625110 1798 ntBASIC19.41■□□□□ 0.7
GABREP78334 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.41■□□□□ 0.7
GABREP78334 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABREP78334 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GABREP78334 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.4■□□□□ 0.7
GABREP78334 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.4■□□□□ 0.7
GABREP78334 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.4■□□□□ 0.7
GABREP78334 AC012306.2-201ENST00000609350 630 ntBASIC19.4■□□□□ 0.7
GABREP78334 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.4■□□□□ 0.7
GABREP78334 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.4■□□□□ 0.7
GABREP78334 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABREP78334 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.39■□□□□ 0.7
GABREP78334 AC242852.2-201ENST00000615738 1807 ntBASIC19.39■□□□□ 0.7
GABREP78334 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GABREP78334 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABREP78334 EP400NL-214ENST00000641289 2402 ntBASIC19.39■□□□□ 0.69
GABREP78334 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABREP78334 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.39■□□□□ 0.69
GABREP78334 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.39■□□□□ 0.69
GABREP78334 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GABREP78334 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABREP78334 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABREP78334 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABREP78334 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.39■□□□□ 0.69
GABREP78334 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.39■□□□□ 0.69
GABREP78334 ECEL1P1-201ENST00000373592 1742 ntBASIC19.39■□□□□ 0.69
GABREP78334 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABREP78334 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
GABREP78334 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABREP78334 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GABREP78334 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms