Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.74■□□□□ 0.43
SEC61A1P61619 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.74■□□□□ 0.43
SEC61A1P61619 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.74■□□□□ 0.43
SEC61A1P61619 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.74■□□□□ 0.43
SEC61A1P61619 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.74■□□□□ 0.43
SEC61A1P61619 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.74■□□□□ 0.43
SEC61A1P61619 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.74■□□□□ 0.43
SEC61A1P61619 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SEC61A1P61619 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.74■□□□□ 0.43
SEC61A1P61619 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.73■□□□□ 0.43
SEC61A1P61619 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.73■□□□□ 0.43
SEC61A1P61619 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SEC61A1P61619 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SEC61A1P61619 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SEC61A1P61619 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.73■□□□□ 0.43
SEC61A1P61619 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.73■□□□□ 0.43
SEC61A1P61619 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SEC61A1P61619 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.73■□□□□ 0.43
SEC61A1P61619 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SEC61A1P61619 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SEC61A1P61619 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SEC61A1P61619 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SEC61A1P61619 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEC61A1P61619 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SEC61A1P61619 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SEC61A1P61619 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEC61A1P61619 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEC61A1P61619 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEC61A1P61619 AP005212.1-201ENST00000581547 1997 ntBASIC17.72■□□□□ 0.43
SEC61A1P61619 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.72■□□□□ 0.43
SEC61A1P61619 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.72■□□□□ 0.43
SEC61A1P61619 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEC61A1P61619 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEC61A1P61619 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SEC61A1P61619 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEC61A1P61619 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEC61A1P61619 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.72■□□□□ 0.43
SEC61A1P61619 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.71■□□□□ 0.43
SEC61A1P61619 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SEC61A1P61619 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SEC61A1P61619 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.71■□□□□ 0.43
SEC61A1P61619 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.71■□□□□ 0.43
SEC61A1P61619 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.71■□□□□ 0.43
SEC61A1P61619 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.71■□□□□ 0.43
SEC61A1P61619 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.71■□□□□ 0.43
SEC61A1P61619 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SEC61A1P61619 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.71■□□□□ 0.43
SEC61A1P61619 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SEC61A1P61619 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
SEC61A1P61619 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SEC61A1P61619 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEC61A1P61619 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SEC61A1P61619 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SEC61A1P61619 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SEC61A1P61619 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.7■□□□□ 0.42
SEC61A1P61619 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms