Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2NP61088 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.89■□□□□ 0.45
UBE2NP61088 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.89■□□□□ 0.45
UBE2NP61088 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.89■□□□□ 0.45
UBE2NP61088 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.89■□□□□ 0.45
UBE2NP61088 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.89■□□□□ 0.45
UBE2NP61088 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2NP61088 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.89■□□□□ 0.45
UBE2NP61088 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2NP61088 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2NP61088 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2NP61088 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2NP61088 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.89■□□□□ 0.45
UBE2NP61088 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
UBE2NP61088 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.88■□□□□ 0.45
UBE2NP61088 AC007375.3-201ENST00000600936 2314 ntBASIC17.88■□□□□ 0.45
UBE2NP61088 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.88■□□□□ 0.45
UBE2NP61088 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.88■□□□□ 0.45
UBE2NP61088 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.88■□□□□ 0.45
UBE2NP61088 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.88■□□□□ 0.45
UBE2NP61088 AL138781.1-201ENST00000566567 1274 ntBASIC17.88■□□□□ 0.45
UBE2NP61088 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.88■□□□□ 0.45
UBE2NP61088 AC133041.1-202ENST00000642053 222 ntBASIC17.88■□□□□ 0.45
UBE2NP61088 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UBE2NP61088 AC087633.2-202ENST00000565166 1439 ntBASIC17.88■□□□□ 0.45
UBE2NP61088 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2NP61088 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.88■□□□□ 0.45
UBE2NP61088 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 AC027702.1-201ENST00000563810 1770 ntBASIC17.87■□□□□ 0.45
UBE2NP61088 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.87■□□□□ 0.45
UBE2NP61088 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.87■□□□□ 0.45
UBE2NP61088 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.87■□□□□ 0.45
UBE2NP61088 AC142086.2-201ENST00000569753 217 ntBASIC17.87■□□□□ 0.45
UBE2NP61088 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.87■□□□□ 0.45
UBE2NP61088 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 AC092118.2-201ENST00000613495 667 ntBASIC17.87■□□□□ 0.45
UBE2NP61088 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
UBE2NP61088 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.87■□□□□ 0.45
UBE2NP61088 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
UBE2NP61088 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UBE2NP61088 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2NP61088 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.86■□□□□ 0.45
UBE2NP61088 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
UBE2NP61088 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UBE2NP61088 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
UBE2NP61088 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.86■□□□□ 0.45
UBE2NP61088 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.86■□□□□ 0.45
UBE2NP61088 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.86■□□□□ 0.45
UBE2NP61088 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
UBE2NP61088 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2NP61088 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBE2NP61088 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.85■□□□□ 0.45
UBE2NP61088 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBE2NP61088 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBE2NP61088 KRT17P1-201ENST00000399211 1546 ntBASIC17.85■□□□□ 0.45
UBE2NP61088 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms