Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CKS1BP61024 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.17□□□□□ -0.14
CKS1BP61024 AC092171.4-201ENST00000609130 632 ntBASIC14.17□□□□□ -0.14
CKS1BP61024 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CKS1BP61024 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CKS1BP61024 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CKS1BP61024 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CKS1BP61024 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.17□□□□□ -0.14
CKS1BP61024 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.17□□□□□ -0.14
CKS1BP61024 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CKS1BP61024 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CKS1BP61024 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.16□□□□□ -0.14
CKS1BP61024 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.16□□□□□ -0.14
CKS1BP61024 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.16□□□□□ -0.14
CKS1BP61024 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CKS1BP61024 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 PKD1P5-201ENST00000532415 10291 ntBASIC14.16□□□□□ -0.14
CKS1BP61024 AC026471.6-201ENST00000622954 1905 ntBASIC14.16□□□□□ -0.14
CKS1BP61024 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CKS1BP61024 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 AC098818.2-201ENST00000564925 2320 ntBASIC14.16□□□□□ -0.14
CKS1BP61024 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CKS1BP61024 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.16□□□□□ -0.14
CKS1BP61024 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.16□□□□□ -0.14
CKS1BP61024 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CKS1BP61024 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS1BP61024 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CKS1BP61024 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CKS1BP61024 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CKS1BP61024 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS1BP61024 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS1BP61024 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS1BP61024 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
CKS1BP61024 AC010141.3-201ENST00000456659 717 ntBASIC14.15□□□□□ -0.14
CKS1BP61024 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS1BP61024 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS1BP61024 AC099791.2-201ENST00000605725 427 ntBASIC14.15□□□□□ -0.14
CKS1BP61024 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS1BP61024 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CKS1BP61024 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CKS1BP61024 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS1BP61024 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS1BP61024 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.14□□□□□ -0.15
CKS1BP61024 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CKS1BP61024 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.14□□□□□ -0.15
CKS1BP61024 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 KRT16P3-201ENST00000439127 1283 ntBASIC14.14□□□□□ -0.15
CKS1BP61024 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.14□□□□□ -0.15
CKS1BP61024 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.14□□□□□ -0.15
CKS1BP61024 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.14□□□□□ -0.15
CKS1BP61024 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 AL356740.2-201ENST00000601559 647 ntBASIC14.14□□□□□ -0.15
CKS1BP61024 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.14□□□□□ -0.15
CKS1BP61024 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.14□□□□□ -0.15
CKS1BP61024 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CKS1BP61024 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS1BP61024 AL133373.2-201ENST00000623187 2828 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms