Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.63■□□□□ 0.57
CLDN20P56880 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN20P56880 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN20P56880 AF201337.1-201ENST00000520239 748 ntBASIC18.63■□□□□ 0.57
CLDN20P56880 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN20P56880 AL162412.1-201ENST00000567129 965 ntBASIC18.63■□□□□ 0.57
CLDN20P56880 AC105036.2-201ENST00000569468 176 ntBASIC18.63■□□□□ 0.57
CLDN20P56880 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLDN20P56880 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN20P56880 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CLDN20P56880 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN20P56880 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN20P56880 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN20P56880 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN20P56880 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN20P56880 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN20P56880 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 AC093787.1-201ENST00000450396 207 ntBASIC18.62■□□□□ 0.57
CLDN20P56880 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 AC069236.1-201ENST00000604339 616 ntBASIC18.62■□□□□ 0.57
CLDN20P56880 AC008694.1-202ENST00000636953 945 ntBASIC18.62■□□□□ 0.57
CLDN20P56880 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLDN20P56880 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLDN20P56880 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN20P56880 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CLDN20P56880 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN20P56880 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN20P56880 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN20P56880 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN20P56880 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN20P56880 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN20P56880 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLDN20P56880 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN20P56880 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN20P56880 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN20P56880 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN20P56880 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN20P56880 GUSBP6-202ENST00000438529 1198 ntBASIC18.61■□□□□ 0.57
CLDN20P56880 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN20P56880 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN20P56880 RARRES2P4-201ENST00000514074 484 ntBASIC18.61■□□□□ 0.57
CLDN20P56880 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN20P56880 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN20P56880 OR10C1-204ENST00000622521 1039 ntBASIC18.61■□□□□ 0.57
CLDN20P56880 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN20P56880 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN20P56880 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN20P56880 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN20P56880 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN20P56880 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN20P56880 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN20P56880 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CLDN20P56880 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLDN20P56880 TSPY6P-201ENST00000448518 926 ntBASIC18.6■□□□□ 0.57
CLDN20P56880 CDV3P1-201ENST00000471403 739 ntBASIC18.6■□□□□ 0.57
CLDN20P56880 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CLDN20P56880 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN20P56880 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN20P56880 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 FEM1AP1-201ENST00000431297 1995 ntBASIC18.6■□□□□ 0.57
CLDN20P56880 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN20P56880 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLDN20P56880 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN20P56880 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN20P56880 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN20P56880 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.6■□□□□ 0.57
CLDN20P56880 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CLDN20P56880 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLDN20P56880 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms