Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN6P56747 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN6P56747 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLDN6P56747 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLDN6P56747 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN6P56747 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN6P56747 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN6P56747 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN6P56747 AC005829.2-201ENST00000571422 1056 ntBASIC19.62■□□□□ 0.73
CLDN6P56747 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.62■□□□□ 0.73
CLDN6P56747 RN7SL850P-201ENST00000579959 291 ntBASIC19.62■□□□□ 0.73
CLDN6P56747 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CLDN6P56747 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN6P56747 AC097493.4-201ENST00000641197 219 ntBASIC19.62■□□□□ 0.73
CLDN6P56747 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN6P56747 AL117328.2-201ENST00000624617 1940 ntBASIC19.62■□□□□ 0.73
CLDN6P56747 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CLDN6P56747 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN6P56747 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN6P56747 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN6P56747 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN6P56747 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLDN6P56747 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN6P56747 AC233723.2-201ENST00000623798 2106 ntBASIC19.61■□□□□ 0.73
CLDN6P56747 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN6P56747 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN6P56747 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.61■□□□□ 0.73
CLDN6P56747 AP001412.1-201ENST00000608405 714 ntBASIC19.61■□□□□ 0.73
CLDN6P56747 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN6P56747 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN6P56747 AC087633.2-202ENST00000565166 1439 ntBASIC19.6■□□□□ 0.73
CLDN6P56747 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN6P56747 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN6P56747 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN6P56747 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN6P56747 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CLDN6P56747 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN6P56747 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN6P56747 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLDN6P56747 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN6P56747 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN6P56747 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.6■□□□□ 0.73
CLDN6P56747 AL353708.3-201ENST00000610272 989 ntBASIC19.6■□□□□ 0.73
CLDN6P56747 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN6P56747 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN6P56747 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN6P56747 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN6P56747 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CLDN6P56747 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CLDN6P56747 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLDN6P56747 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLDN6P56747 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLDN6P56747 TMPOP1-202ENST00000424642 1267 ntBASIC19.59■□□□□ 0.73
CLDN6P56747 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.59■□□□□ 0.73
CLDN6P56747 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.59■□□□□ 0.73
CLDN6P56747 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN6P56747 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN6P56747 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLDN6P56747 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CLDN6P56747 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN6P56747 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN6P56747 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CLDN6P56747 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLDN6P56747 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN6P56747 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN6P56747 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLDN6P56747 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN6P56747 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms