Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.19■□□□□ 0.02
CMC4P56277 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CMC4P56277 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CMC4P56277 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CMC4P56277 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CMC4P56277 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.18■□□□□ 0.02
CMC4P56277 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CMC4P56277 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CMC4P56277 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CMC4P56277 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CMC4P56277 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.18■□□□□ 0.02
CMC4P56277 AC093787.1-201ENST00000450396 207 ntBASIC15.18■□□□□ 0.02
CMC4P56277 AC097658.1-201ENST00000475555 843 ntBASIC15.18■□□□□ 0.02
CMC4P56277 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.18■□□□□ 0.02
CMC4P56277 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.18■□□□□ 0.02
CMC4P56277 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CMC4P56277 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CMC4P56277 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CMC4P56277 AC105020.6-201ENST00000621523 1217 ntBASIC15.18■□□□□ 0.02
CMC4P56277 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CMC4P56277 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CMC4P56277 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CMC4P56277 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CMC4P56277 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CMC4P56277 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CMC4P56277 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.18■□□□□ 0.02
CMC4P56277 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CMC4P56277 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CMC4P56277 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CMC4P56277 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CMC4P56277 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.17■□□□□ 0.02
CMC4P56277 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CMC4P56277 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CMC4P56277 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.17■□□□□ 0.02
CMC4P56277 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.17■□□□□ 0.02
CMC4P56277 AC104771.1-201ENST00000603335 964 ntBASIC15.17■□□□□ 0.02
CMC4P56277 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
CMC4P56277 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 KRT8P36-201ENST00000489121 1440 ntBASIC15.17■□□□□ 0.02
CMC4P56277 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CMC4P56277 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.16■□□□□ 0.02
CMC4P56277 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CMC4P56277 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.16■□□□□ 0.02
CMC4P56277 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CMC4P56277 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.16■□□□□ 0.02
CMC4P56277 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.16■□□□□ 0.02
CMC4P56277 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.16■□□□□ 0.02
CMC4P56277 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.16■□□□□ 0.02
CMC4P56277 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CMC4P56277 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.16■□□□□ 0.02
CMC4P56277 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.16■□□□□ 0.02
CMC4P56277 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CMC4P56277 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.16■□□□□ 0.02
CMC4P56277 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CMC4P56277 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CMC4P56277 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CMC4P56277 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CMC4P56277 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMC4P56277 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMC4P56277 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CMC4P56277 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMC4P56277 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CMC4P56277 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CMC4P56277 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMC4P56277 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.15■□□□□ 0.02
CMC4P56277 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMC4P56277 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms