Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC092720.2-201ENST00000602388 1665 ntBASIC18.93■□□□□ 0.62
CDH12P55289 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH12P55289 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDH12P55289 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH12P55289 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH12P55289 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH12P55289 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH12P55289 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH12P55289 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH12P55289 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH12P55289 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.93■□□□□ 0.62
CDH12P55289 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH12P55289 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH12P55289 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH12P55289 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH12P55289 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH12P55289 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH12P55289 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH12P55289 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH12P55289 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH12P55289 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH12P55289 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDH12P55289 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH12P55289 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
CDH12P55289 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH12P55289 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH12P55289 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH12P55289 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CDH12P55289 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDH12P55289 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH12P55289 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.92■□□□□ 0.62
CDH12P55289 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH12P55289 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.92■□□□□ 0.62
CDH12P55289 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.92■□□□□ 0.62
CDH12P55289 AC138907.5-202ENST00000569484 235 ntBASIC18.92■□□□□ 0.62
CDH12P55289 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH12P55289 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH12P55289 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDH12P55289 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH12P55289 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH12P55289 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH12P55289 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH12P55289 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH12P55289 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH12P55289 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH12P55289 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH12P55289 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH12P55289 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDH12P55289 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH12P55289 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH12P55289 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH12P55289 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH12P55289 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CDH12P55289 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH12P55289 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDH12P55289 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH12P55289 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CDH12P55289 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDH12P55289 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH12P55289 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.62
CDH12P55289 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH12P55289 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDH12P55289 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH12P55289 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH12P55289 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH12P55289 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH12P55289 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH12P55289 AC123595.1-201ENST00000440769 1046 ntBASIC18.89■□□□□ 0.61
CDH12P55289 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CDH12P55289 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH12P55289 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CDH12P55289 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH12P55289 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH12P55289 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH12P55289 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH12P55289 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH12P55289 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH12P55289 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms