Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CLNS1AP54105 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.18■□□□□ 0.82
CLNS1AP54105 AC131281.2-201ENST00000520478 145 ntBASIC20.18■□□□□ 0.82
CLNS1AP54105 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLNS1AP54105 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLNS1AP54105 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.18■□□□□ 0.82
CLNS1AP54105 AL049796.1-201ENST00000565336 1766 ntBASIC20.18■□□□□ 0.82
CLNS1AP54105 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLNS1AP54105 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLNS1AP54105 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLNS1AP54105 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.17■□□□□ 0.82
CLNS1AP54105 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLNS1AP54105 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLNS1AP54105 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
CLNS1AP54105 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CLNS1AP54105 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CLNS1AP54105 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLNS1AP54105 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLNS1AP54105 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLNS1AP54105 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.17■□□□□ 0.82
CLNS1AP54105 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CLNS1AP54105 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLNS1AP54105 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLNS1AP54105 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.17■□□□□ 0.82
CLNS1AP54105 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLNS1AP54105 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.16■□□□□ 0.82
CLNS1AP54105 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.16■□□□□ 0.82
CLNS1AP54105 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.16■□□□□ 0.82
CLNS1AP54105 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.16■□□□□ 0.82
CLNS1AP54105 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLNS1AP54105 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLNS1AP54105 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 AC116562.4-201ENST00000641316 2276 ntBASIC20.16■□□□□ 0.82
CLNS1AP54105 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CLNS1AP54105 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 AC005332.8-201ENST00000622750 2735 ntBASIC20.16■□□□□ 0.82
CLNS1AP54105 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLNS1AP54105 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLNS1AP54105 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CLNS1AP54105 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLNS1AP54105 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLNS1AP54105 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLNS1AP54105 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.15■□□□□ 0.82
CLNS1AP54105 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLNS1AP54105 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.15■□□□□ 0.82
CLNS1AP54105 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLNS1AP54105 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
CLNS1AP54105 AC073314.1-201ENST00000568729 2216 ntBASIC20.15■□□□□ 0.82
CLNS1AP54105 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLNS1AP54105 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.15■□□□□ 0.82
CLNS1AP54105 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLNS1AP54105 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLNS1AP54105 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLNS1AP54105 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLNS1AP54105 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLNS1AP54105 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.14■□□□□ 0.81
CLNS1AP54105 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.14■□□□□ 0.81
CLNS1AP54105 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.14■□□□□ 0.81
CLNS1AP54105 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.14■□□□□ 0.81
CLNS1AP54105 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.14■□□□□ 0.81
CLNS1AP54105 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.14■□□□□ 0.81
CLNS1AP54105 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
CLNS1AP54105 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLNS1AP54105 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.13■□□□□ 0.81
CLNS1AP54105 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.13■□□□□ 0.81
CLNS1AP54105 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.13■□□□□ 0.81
CLNS1AP54105 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms