Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGA2P52926 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGA2P52926 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGA2P52926 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGA2P52926 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGA2P52926 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGA2P52926 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGA2P52926 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HMGA2P52926 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HMGA2P52926 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGA2P52926 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGA2P52926 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGA2P52926 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGA2P52926 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGA2P52926 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
HMGA2P52926 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HMGA2P52926 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGA2P52926 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGA2P52926 AL691432.2-201ENST00000607222 2038 ntBASIC18.59■□□□□ 0.57
HMGA2P52926 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGA2P52926 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGA2P52926 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGA2P52926 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGA2P52926 SUDS3P1-201ENST00000505831 966 ntBASIC18.59■□□□□ 0.57
HMGA2P52926 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGA2P52926 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGA2P52926 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGA2P52926 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGA2P52926 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGA2P52926 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HMGA2P52926 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGA2P52926 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGA2P52926 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HMGA2P52926 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.58■□□□□ 0.57
HMGA2P52926 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGA2P52926 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HMGA2P52926 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
HMGA2P52926 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGA2P52926 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.58■□□□□ 0.57
HMGA2P52926 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGA2P52926 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGA2P52926 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGA2P52926 IRS3P-201ENST00000223076 1006 ntBASIC18.58■□□□□ 0.56
HMGA2P52926 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HMGA2P52926 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGA2P52926 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGA2P52926 AC110285.6-201ENST00000617652 491 ntBASIC18.58■□□□□ 0.56
HMGA2P52926 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGA2P52926 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGA2P52926 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HMGA2P52926 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGA2P52926 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.57■□□□□ 0.56
HMGA2P52926 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HMGA2P52926 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGA2P52926 AC008406.3-201ENST00000620001 1374 ntBASIC18.57■□□□□ 0.56
HMGA2P52926 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGA2P52926 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGA2P52926 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.57■□□□□ 0.56
HMGA2P52926 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.57■□□□□ 0.56
HMGA2P52926 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.57■□□□□ 0.56
HMGA2P52926 SLC7A5P2-201ENST00000553010 536 ntBASIC18.57■□□□□ 0.56
HMGA2P52926 AC243732.1-201ENST00000612648 864 ntBASIC18.57■□□□□ 0.56
HMGA2P52926 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.57■□□□□ 0.56
HMGA2P52926 AC087289.5-201ENST00000586076 3175 ntBASIC18.57■□□□□ 0.56
HMGA2P52926 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGA2P52926 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGA2P52926 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HMGA2P52926 RNF165-205ENST00000588679 2904 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGA2P52926 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGA2P52926 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HMGA2P52926 BX119927.1-201ENST00000636596 1552 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
HMGA2P52926 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGA2P52926 AC091799.1-201ENST00000422823 811 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGA2P52926 DUX4L2-201ENST00000561772 1275 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGA2P52926 AC131212.1-201ENST00000613771 668 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
HMGA2P52926 DUX4L6-201ENST00000626483 1275 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 DUX4L1-201ENST00000627662 1275 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 DUX4L8-201ENST00000629013 1275 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 DUX4L3-201ENST00000630187 1275 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 DUX4L7-201ENST00000630678 1275 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 DUX4L5-201ENST00000630834 1275 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 DPP3P2-201ENST00000416030 1696 ntBASIC18.56■□□□□ 0.56
HMGA2P52926 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGA2P52926 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGA2P52926 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms