Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.7■■□□□ 1.22
CPT1AP50416 BX088651.1-201ENST00000540551 451 ntBASIC22.7■■□□□ 1.22
CPT1AP50416 RARRES2P10-201ENST00000564312 460 ntBASIC22.7■■□□□ 1.22
CPT1AP50416 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPT1AP50416 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPT1AP50416 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CPT1AP50416 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPT1AP50416 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CPT1AP50416 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPT1AP50416 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CPT1AP50416 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CPT1AP50416 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPT1AP50416 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPT1AP50416 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.69■■□□□ 1.22
CPT1AP50416 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPT1AP50416 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.69■■□□□ 1.22
CPT1AP50416 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPT1AP50416 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPT1AP50416 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.69■■□□□ 1.22
CPT1AP50416 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPT1AP50416 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.69■■□□□ 1.22
CPT1AP50416 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.69■■□□□ 1.22
CPT1AP50416 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.69■■□□□ 1.22
CPT1AP50416 MIR4785-201ENST00000585005 73 ntBASIC22.69■■□□□ 1.22
CPT1AP50416 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
CPT1AP50416 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.69■■□□□ 1.22
CPT1AP50416 LINC01023-201ENST00000606054 436 ntBASIC22.69■■□□□ 1.22
CPT1AP50416 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.69■■□□□ 1.22
CPT1AP50416 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPT1AP50416 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.69■■□□□ 1.22
CPT1AP50416 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
CPT1AP50416 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPT1AP50416 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.68■■□□□ 1.22
CPT1AP50416 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.68■■□□□ 1.22
CPT1AP50416 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.68■■□□□ 1.22
CPT1AP50416 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.68■■□□□ 1.22
CPT1AP50416 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CPT1AP50416 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPT1AP50416 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CPT1AP50416 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPT1AP50416 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPT1AP50416 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPT1AP50416 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPT1AP50416 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPT1AP50416 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPT1AP50416 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.67■■□□□ 1.22
CPT1AP50416 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.67■■□□□ 1.22
CPT1AP50416 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.67■■□□□ 1.22
CPT1AP50416 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.67■■□□□ 1.22
CPT1AP50416 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CPT1AP50416 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.67■■□□□ 1.22
CPT1AP50416 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.67■■□□□ 1.22
CPT1AP50416 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CPT1AP50416 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CPT1AP50416 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPT1AP50416 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPT1AP50416 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPT1AP50416 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPT1AP50416 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CPT1AP50416 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPT1AP50416 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPT1AP50416 AC023632.3-201ENST00000521633 145 ntBASIC22.66■■□□□ 1.22
CPT1AP50416 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPT1AP50416 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.66■■□□□ 1.22
CPT1AP50416 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPT1AP50416 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.66■■□□□ 1.22
CPT1AP50416 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CPT1AP50416 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPT1AP50416 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.65■■□□□ 1.22
CPT1AP50416 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.65■■□□□ 1.22
CPT1AP50416 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPT1AP50416 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
CPT1AP50416 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CPT1AP50416 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CPT1AP50416 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPT1AP50416 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.65■■□□□ 1.22
CPT1AP50416 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.65■■□□□ 1.22
CPT1AP50416 AC113410.3-201ENST00000623366 203 ntBASIC22.65■■□□□ 1.22
CPT1AP50416 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CPT1AP50416 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.65■■□□□ 1.22
CPT1AP50416 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.65■■□□□ 1.22
CPT1AP50416 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CPT1AP50416 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPT1AP50416 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPT1AP50416 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPT1AP50416 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.64■■□□□ 1.22
CPT1AP50416 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.64■■□□□ 1.22
CPT1AP50416 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.64■■□□□ 1.22
CPT1AP50416 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPT1AP50416 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPT1AP50416 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
CPT1AP50416 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CPT1AP50416 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.64■■□□□ 1.21
CPT1AP50416 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.64■■□□□ 1.21
CPT1AP50416 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.64■■□□□ 1.21
CPT1AP50416 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.64■■□□□ 1.21
CPT1AP50416 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.64■■□□□ 1.21
CPT1AP50416 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.64■■□□□ 1.21
CPT1AP50416 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.64■■□□□ 1.21
CPT1AP50416 AL121829.2-201ENST00000620908 328 ntBASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms