Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT6CP48668 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
KRT6CP48668 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6CP48668 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6CP48668 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6CP48668 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KRT6CP48668 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6CP48668 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.71■□□□□ 0.75
KRT6CP48668 AL162377.1-201ENST00000618844 1793 ntBASIC19.71■□□□□ 0.75
KRT6CP48668 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6CP48668 AC007322.3-201ENST00000426526 701 ntBASIC19.71■□□□□ 0.75
KRT6CP48668 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6CP48668 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6CP48668 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6CP48668 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6CP48668 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KRT6CP48668 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6CP48668 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6CP48668 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6CP48668 AL512408.1-201ENST00000569378 2000 ntBASIC19.71■□□□□ 0.75
KRT6CP48668 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6CP48668 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KRT6CP48668 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KRT6CP48668 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT6CP48668 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
KRT6CP48668 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT6CP48668 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT6CP48668 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.7■□□□□ 0.74
KRT6CP48668 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT6CP48668 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT6CP48668 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT6CP48668 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT6CP48668 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT6CP48668 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
KRT6CP48668 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.69■□□□□ 0.74
KRT6CP48668 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT6CP48668 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT6CP48668 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT6CP48668 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT6CP48668 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT6CP48668 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT6CP48668 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT6CP48668 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT6CP48668 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT6CP48668 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT6CP48668 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.68■□□□□ 0.74
KRT6CP48668 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT6CP48668 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT6CP48668 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KRT6CP48668 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
KRT6CP48668 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 CDV3P1-201ENST00000471403 739 ntBASIC19.68■□□□□ 0.74
KRT6CP48668 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KRT6CP48668 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KRT6CP48668 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT6CP48668 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT6CP48668 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KRT6CP48668 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT6CP48668 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT6CP48668 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KRT6CP48668 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT6CP48668 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KRT6CP48668 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.67■□□□□ 0.74
KRT6CP48668 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.67■□□□□ 0.74
KRT6CP48668 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT6CP48668 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.67■□□□□ 0.74
KRT6CP48668 UBE2DNL-204ENST00000602536 740 ntBASIC19.67■□□□□ 0.74
KRT6CP48668 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT6CP48668 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT6CP48668 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms