Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CXCL12P48061 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CXCL12P48061 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CXCL12P48061 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CXCL12P48061 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CXCL12P48061 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CXCL12P48061 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.41■□□□□ 0.86
CXCL12P48061 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.41■□□□□ 0.86
CXCL12P48061 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.41■□□□□ 0.86
CXCL12P48061 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CXCL12P48061 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.41■□□□□ 0.86
CXCL12P48061 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CXCL12P48061 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.41■□□□□ 0.86
CXCL12P48061 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CXCL12P48061 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CXCL12P48061 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.41■□□□□ 0.86
CXCL12P48061 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CXCL12P48061 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CXCL12P48061 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL12P48061 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL12P48061 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL12P48061 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL12P48061 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL12P48061 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL12P48061 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CXCL12P48061 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL12P48061 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL12P48061 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.4■□□□□ 0.86
CXCL12P48061 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.4■□□□□ 0.86
CXCL12P48061 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.4■□□□□ 0.86
CXCL12P48061 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.4■□□□□ 0.86
CXCL12P48061 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.4■□□□□ 0.86
CXCL12P48061 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.4■□□□□ 0.86
CXCL12P48061 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL12P48061 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CXCL12P48061 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CXCL12P48061 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.39■□□□□ 0.85
CXCL12P48061 AC005521.1-201ENST00000393351 872 ntBASIC20.39■□□□□ 0.85
CXCL12P48061 RBM17P1-201ENST00000453646 1190 ntBASIC20.39■□□□□ 0.85
CXCL12P48061 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.39■□□□□ 0.85
CXCL12P48061 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.39■□□□□ 0.85
CXCL12P48061 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.39■□□□□ 0.85
CXCL12P48061 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CXCL12P48061 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CXCL12P48061 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CXCL12P48061 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CXCL12P48061 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.38■□□□□ 0.85
CXCL12P48061 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.38■□□□□ 0.85
CXCL12P48061 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.38■□□□□ 0.85
CXCL12P48061 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 UNC93B2-201ENST00000285383 730 ntBASIC20.38■□□□□ 0.85
CXCL12P48061 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.38■□□□□ 0.85
CXCL12P48061 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.38■□□□□ 0.85
CXCL12P48061 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.38■□□□□ 0.85
CXCL12P48061 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.38■□□□□ 0.85
CXCL12P48061 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL12P48061 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CXCL12P48061 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 C1orf229-201ENST00000623686 2258 ntBASIC20.37■□□□□ 0.85
CXCL12P48061 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.37■□□□□ 0.85
CXCL12P48061 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.37■□□□□ 0.85
CXCL12P48061 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 NUDT16P1-203ENST00000513809 620 ntBASIC20.37■□□□□ 0.85
CXCL12P48061 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.37■□□□□ 0.85
CXCL12P48061 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.37■□□□□ 0.85
CXCL12P48061 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.37■□□□□ 0.85
CXCL12P48061 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.37■□□□□ 0.85
CXCL12P48061 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
CXCL12P48061 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.37■□□□□ 0.85
CXCL12P48061 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.37■□□□□ 0.85
CXCL12P48061 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.37■□□□□ 0.85
CXCL12P48061 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.37■□□□□ 0.85
CXCL12P48061 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL12P48061 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CXCL12P48061 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXCL12P48061 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CXCL12P48061 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CXCL12P48061 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXCL12P48061 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXCL12P48061 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXCL12P48061 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CXCL12P48061 AP002982.1-201ENST00000492365 877 ntBASIC20.36■□□□□ 0.85
CXCL12P48061 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.36■□□□□ 0.85
CXCL12P48061 AC004264.1-201ENST00000608354 794 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms