Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HTR3AP46098 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR3AP46098 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR3AP46098 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR3AP46098 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR3AP46098 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.76■□□□□ 0.59
HTR3AP46098 AC116050.2-201ENST00000612102 1779 ntBASIC18.76■□□□□ 0.59
HTR3AP46098 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR3AP46098 FEM1AP1-201ENST00000431297 1995 ntBASIC18.75■□□□□ 0.59
HTR3AP46098 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR3AP46098 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR3AP46098 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR3AP46098 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HTR3AP46098 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.74■□□□□ 0.59
HTR3AP46098 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HTR3AP46098 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.74■□□□□ 0.59
HTR3AP46098 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.74■□□□□ 0.59
HTR3AP46098 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HTR3AP46098 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HTR3AP46098 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HTR3AP46098 MIR935-201ENST00000401179 91 ntBASIC18.74■□□□□ 0.59
HTR3AP46098 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.74■□□□□ 0.59
HTR3AP46098 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.74■□□□□ 0.59
HTR3AP46098 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.74■□□□□ 0.59
HTR3AP46098 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HTR3AP46098 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HTR3AP46098 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HTR3AP46098 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HTR3AP46098 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HTR3AP46098 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.74■□□□□ 0.59
HTR3AP46098 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.74■□□□□ 0.59
HTR3AP46098 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.73■□□□□ 0.59
HTR3AP46098 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.73■□□□□ 0.59
HTR3AP46098 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HTR3AP46098 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.73■□□□□ 0.59
HTR3AP46098 AC010536.3-201ENST00000620306 533 ntBASIC18.73■□□□□ 0.59
HTR3AP46098 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.73■□□□□ 0.59
HTR3AP46098 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HTR3AP46098 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.73■□□□□ 0.59
HTR3AP46098 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.73■□□□□ 0.59
HTR3AP46098 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.73■□□□□ 0.59
HTR3AP46098 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR3AP46098 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.72■□□□□ 0.59
HTR3AP46098 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
HTR3AP46098 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.72■□□□□ 0.59
HTR3AP46098 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 PLK5-205ENST00000642079 1969 ntBASIC18.72■□□□□ 0.59
HTR3AP46098 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HTR3AP46098 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HTR3AP46098 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 CDV3P1-201ENST00000471403 739 ntBASIC18.72■□□□□ 0.59
HTR3AP46098 TERF1P5-201ENST00000477545 1207 ntBASIC18.72■□□□□ 0.59
HTR3AP46098 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.72■□□□□ 0.59
HTR3AP46098 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HTR3AP46098 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HTR3AP46098 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR3AP46098 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.71■□□□□ 0.59
HTR3AP46098 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 AC091799.1-201ENST00000422823 811 ntBASIC18.71■□□□□ 0.59
HTR3AP46098 AC006015.1-201ENST00000429970 570 ntBASIC18.71■□□□□ 0.59
HTR3AP46098 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.71■□□□□ 0.59
HTR3AP46098 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HTR3AP46098 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTR3AP46098 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
HTR3AP46098 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms