Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSKP43235 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.28■□□□□ 0.84
CTSKP43235 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTSKP43235 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSKP43235 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSKP43235 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CTSKP43235 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSKP43235 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSKP43235 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSKP43235 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSKP43235 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CTSKP43235 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSKP43235 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSKP43235 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSKP43235 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSKP43235 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSKP43235 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSKP43235 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.27■□□□□ 0.84
CTSKP43235 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSKP43235 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CTSKP43235 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTSKP43235 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTSKP43235 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTSKP43235 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTSKP43235 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.27■□□□□ 0.83
CTSKP43235 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CTSKP43235 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSKP43235 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.26■□□□□ 0.83
CTSKP43235 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.26■□□□□ 0.83
CTSKP43235 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTSKP43235 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSKP43235 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.26■□□□□ 0.83
CTSKP43235 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.26■□□□□ 0.83
CTSKP43235 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.26■□□□□ 0.83
CTSKP43235 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CTSKP43235 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 FBXW4P1-201ENST00000426721 2239 ntBASIC20.26■□□□□ 0.83
CTSKP43235 AC116050.2-201ENST00000612102 1779 ntBASIC20.26■□□□□ 0.83
CTSKP43235 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.26■□□□□ 0.83
CTSKP43235 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSKP43235 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CTSKP43235 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTSKP43235 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSKP43235 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSKP43235 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSKP43235 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
CTSKP43235 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.25■□□□□ 0.83
CTSKP43235 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSKP43235 MIR4497-201ENST00000583208 89 ntBASIC20.25■□□□□ 0.83
CTSKP43235 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.25■□□□□ 0.83
CTSKP43235 Z99916.2-201ENST00000604037 246 ntBASIC20.25■□□□□ 0.83
CTSKP43235 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.25■□□□□ 0.83
CTSKP43235 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSKP43235 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.25■□□□□ 0.83
CTSKP43235 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSKP43235 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CTSKP43235 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CTSKP43235 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSKP43235 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.25■□□□□ 0.83
CTSKP43235 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.25■□□□□ 0.83
CTSKP43235 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSKP43235 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CTSKP43235 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CTSKP43235 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSKP43235 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSKP43235 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSKP43235 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSKP43235 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSKP43235 POM121L13P-201ENST00000422362 380 ntBASIC20.24■□□□□ 0.83
CTSKP43235 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.24■□□□□ 0.83
CTSKP43235 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSKP43235 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CTSKP43235 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSKP43235 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSKP43235 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSKP43235 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.24■□□□□ 0.83
CTSKP43235 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSKP43235 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.23■□□□□ 0.83
CTSKP43235 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSKP43235 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSKP43235 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSKP43235 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.23■□□□□ 0.83
CTSKP43235 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSKP43235 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CTSKP43235 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSKP43235 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSKP43235 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSKP43235 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms