Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 PLC1YPL268W 2610 nt1.29□□□□□ -2.2
PGD1P40356 STB4YMR019W 2850 nt1.29□□□□□ -2.2
PGD1P40356 snR5snR5 204 nt1.29□□□□□ -2.2
PGD1P40356 YDR194W-AYDR194W-A 153 nt1.29□□□□□ -2.2
PGD1P40356 YER038W-AYER038W-A 381 nt1.29□□□□□ -2.2
PGD1P40356 YJL047C-AYJL047C-A 135 nt1.29□□□□□ -2.2
PGD1P40356 SDS22YKL193C 1017 nt1.29□□□□□ -2.2
PGD1P40356 YMR304C-AYMR304C-A 351 nt1.29□□□□□ -2.2
PGD1P40356 GRX5YPL059W 453 nt1.29□□□□□ -2.2
PGD1P40356 YCL002CYCL002C 792 nt1.29□□□□□ -2.2
PGD1P40356 CRM1YGR218W 3255 nt1.28□□□□□ -2.2
PGD1P40356 FIG2YCR089W 4830 nt1.28□□□□□ -2.2
PGD1P40356 YHR073W-AYHR073W-A 177 nt1.28□□□□□ -2.2
PGD1P40356 BUD19YJL188C 309 nt1.28□□□□□ -2.2
PGD1P40356 RPC25YKL144C 639 nt1.28□□□□□ -2.2
PGD1P40356 ARV1YLR242C 966 nt1.28□□□□□ -2.2
PGD1P40356 YOR364WYOR364W 369 nt1.28□□□□□ -2.2
PGD1P40356 SPE1YKL184W 1401 nt1.28□□□□□ -2.2
PGD1P40356 ARP7YPR034W 1434 nt1.28□□□□□ -2.2
PGD1P40356 DPB11YJL090C 2295 nt1.27□□□□□ -2.21
PGD1P40356 YDR210W-AYDR210W-A 1317 nt1.27□□□□□ -2.21
PGD1P40356 YOR343W-AYOR343W-A 1317 nt1.27□□□□□ -2.21
PGD1P40356 snR83snR83 306 nt1.27□□□□□ -2.21
PGD1P40356 YDR042CYDR042C 603 nt1.27□□□□□ -2.21
PGD1P40356 MZM1YDR493W 372 nt1.27□□□□□ -2.21
PGD1P40356 LAG1YHL003C 1236 nt1.27□□□□□ -2.21
PGD1P40356 RPS7BYNL096C 573 nt1.27□□□□□ -2.21
PGD1P40356 BRR2YER172C 6492 nt1.27□□□□□ -2.21
PGD1P40356 HIR3YJR140C 4947 nt1.27□□□□□ -2.21
PGD1P40356 RRI2YOL117W 1938 nt1.27□□□□□ -2.21
PGD1P40356 PBY1YBR094W 2262 nt1.26□□□□□ -2.21
PGD1P40356 TMA20YER007C-A 546 nt1.26□□□□□ -2.21
PGD1P40356 MND1YGL183C 660 nt1.26□□□□□ -2.21
PGD1P40356 YIL030W-AYIL030W-A 339 nt1.26□□□□□ -2.21
PGD1P40356 CYB5YNL111C 363 nt1.26□□□□□ -2.21
PGD1P40356 PHO80YOL001W 882 nt1.26□□□□□ -2.21
PGD1P40356 RTC6YPL183W-A 282 nt1.26□□□□□ -2.21
PGD1P40356 ROX1YPR065W 1107 nt1.26□□□□□ -2.21
PGD1P40356 SEC21YNL287W 2808 nt1.26□□□□□ -2.21
PGD1P40356 GRR1YJR090C 3456 nt1.25□□□□□ -2.21
PGD1P40356 RPH1YER169W 2391 nt1.25□□□□□ -2.21
PGD1P40356 VOA1YGR106C 798 nt1.25□□□□□ -2.21
PGD1P40356 SPO11YHL022C 1197 nt1.25□□□□□ -2.21
PGD1P40356 BET4YJL031C 984 nt1.25□□□□□ -2.21
PGD1P40356 URA10YMR271C 684 nt1.25□□□□□ -2.21
PGD1P40356 FYV12YOR183W 390 nt1.25□□□□□ -2.21
PGD1P40356 CDC27YBL084C 2277 nt1.25□□□□□ -2.21
PGD1P40356 MUD2YKL074C 1584 nt1.25□□□□□ -2.21
PGD1P40356 BNA7YDR428C 786 nt1.24□□□□□ -2.21
PGD1P40356 TIM8YJR135W-A 264 nt1.24□□□□□ -2.21
PGD1P40356 YNL010WYNL010W 726 nt1.24□□□□□ -2.21
PGD1P40356 YNL050CYNL050C 813 nt1.24□□□□□ -2.21
PGD1P40356 YPL080CYPL080C 327 nt1.24□□□□□ -2.21
PGD1P40356 APM3YBR288C 1452 nt1.24□□□□□ -2.21
PGD1P40356 AHC1YOR023C 1701 nt1.23□□□□□ -2.21
PGD1P40356 MAD1YGL086W 2250 nt1.23□□□□□ -2.21
PGD1P40356 YHC1YLR298C 696 nt1.23□□□□□ -2.21
PGD1P40356 YMR254CYMR254C 309 nt1.23□□□□□ -2.21
PGD1P40356 CMC2YBL059C-A 330 nt1.23□□□□□ -2.21
PGD1P40356 SNC2YOR327C 348 nt1.23□□□□□ -2.21
PGD1P40356 YCL007CYCL007C 393 nt1.23□□□□□ -2.21
PGD1P40356 YLR419WYLR419W 4308 nt1.23□□□□□ -2.21
PGD1P40356 Q0255Q0255 1419 nt1.23□□□□□ -2.21
PGD1P40356 RIC1YLR039C 3171 nt1.22□□□□□ -2.21
PGD1P40356 YFL002W-BYFL002W-B 1317 nt1.22□□□□□ -2.21
PGD1P40356 YGR161W-AYGR161W-A 1317 nt1.22□□□□□ -2.21
PGD1P40356 YBL100W-AYBL100W-A 1317 nt1.22□□□□□ -2.21
PGD1P40356 YCL020WYCL020W 1317 nt1.22□□□□□ -2.21
PGD1P40356 snR78snR78 87 nt1.22□□□□□ -2.21
PGD1P40356 RNR4YGR180C 1038 nt1.22□□□□□ -2.21
PGD1P40356 YGR228WYGR228W 345 nt1.22□□□□□ -2.21
PGD1P40356 YHR054CYHR054C 1065 nt1.22□□□□□ -2.21
PGD1P40356 SEC28YIL076W 891 nt1.22□□□□□ -2.21
PGD1P40356 CMS1YLR003C 876 nt1.22□□□□□ -2.21
PGD1P40356 TRX1YLR043C 312 nt1.22□□□□□ -2.21
PGD1P40356 YMR013C-AYMR013C-A 150 nt1.22□□□□□ -2.21
PGD1P40356 CSI1YMR025W 888 nt1.22□□□□□ -2.21
PGD1P40356 YMR324CYMR324C 243 nt1.22□□□□□ -2.21
PGD1P40356 YPR172WYPR172W 603 nt1.22□□□□□ -2.21
PGD1P40356 NUP82YJL061W 2142 nt1.22□□□□□ -2.21
PGD1P40356 SEC63YOR254C 1992 nt1.21□□□□□ -2.22
PGD1P40356 RVS161YCR009C 798 nt1.2□□□□□ -2.22
PGD1P40356 CDC36YDL165W 576 nt1.2□□□□□ -2.22
PGD1P40356 snR9snR9 187 nt1.2□□□□□ -2.22
PGD1P40356 GIC1YHR061C 945 nt1.2□□□□□ -2.22
PGD1P40356 YLR140WYLR140W 327 nt1.2□□□□□ -2.22
PGD1P40356 YPL039WYPL039W 951 nt1.2□□□□□ -2.22
PGD1P40356 ASM4YDL088C 1587 nt1.2□□□□□ -2.22
PGD1P40356 MDM32YOR147W 1869 nt1.2□□□□□ -2.22
PGD1P40356 KCS1YDR017C 3153 nt1.2□□□□□ -2.22
PGD1P40356 NOT5YPR072W 1683 nt1.2□□□□□ -2.22
PGD1P40356 YDL068WYDL068W 330 nt1.19□□□□□ -2.22
PGD1P40356 RTR2YDR066C 591 nt1.19□□□□□ -2.22
PGD1P40356 CAJ1YER048C 1176 nt1.19□□□□□ -2.22
PGD1P40356 YIL102CYIL102C 306 nt1.19□□□□□ -2.22
PGD1P40356 LCL2YLR104W 396 nt1.19□□□□□ -2.22
PGD1P40356 COA6YMR244C-A 315 nt1.19□□□□□ -2.22
PGD1P40356 YBL083CYBL083C 426 nt1.19□□□□□ -2.22
PGD1P40356 ATP20YPR020W 348 nt1.19□□□□□ -2.22
PGD1P40356 YPR096CYPR096C 303 nt1.19□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms