Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.69■□□□□ 0.42
GDNFP39905 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.69■□□□□ 0.42
GDNFP39905 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.69■□□□□ 0.42
GDNFP39905 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GDNFP39905 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.69■□□□□ 0.42
GDNFP39905 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.69■□□□□ 0.42
GDNFP39905 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDNFP39905 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
GDNFP39905 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
GDNFP39905 AP000974.1-201ENST00000623909 2387 ntBASIC17.68■□□□□ 0.42
GDNFP39905 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.68■□□□□ 0.42
GDNFP39905 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GDNFP39905 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.68■□□□□ 0.42
GDNFP39905 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.68■□□□□ 0.42
GDNFP39905 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GDNFP39905 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.68■□□□□ 0.42
GDNFP39905 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDNFP39905 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDNFP39905 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.67■□□□□ 0.42
GDNFP39905 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDNFP39905 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.67■□□□□ 0.42
GDNFP39905 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.67■□□□□ 0.42
GDNFP39905 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDNFP39905 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
GDNFP39905 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.67■□□□□ 0.42
GDNFP39905 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.67■□□□□ 0.42
GDNFP39905 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDNFP39905 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
GDNFP39905 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDNFP39905 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDNFP39905 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GDNFP39905 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDNFP39905 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
GDNFP39905 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GDNFP39905 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.66■□□□□ 0.42
GDNFP39905 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.66■□□□□ 0.42
GDNFP39905 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
GDNFP39905 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.66■□□□□ 0.42
GDNFP39905 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 AP006587.3-201ENST00000525742 1516 ntBASIC17.66■□□□□ 0.42
GDNFP39905 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GDNFP39905 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.66■□□□□ 0.42
GDNFP39905 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDNFP39905 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDNFP39905 TNXA-203ENST00000507684 2038 ntBASIC17.65■□□□□ 0.42
GDNFP39905 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GDNFP39905 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDNFP39905 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GDNFP39905 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDNFP39905 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDNFP39905 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDNFP39905 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.65■□□□□ 0.42
GDNFP39905 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.65■□□□□ 0.42
GDNFP39905 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.65■□□□□ 0.42
GDNFP39905 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.65■□□□□ 0.42
GDNFP39905 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.65■□□□□ 0.42
GDNFP39905 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.65■□□□□ 0.42
GDNFP39905 AC105233.4-201ENST00000642045 216 ntBASIC17.65■□□□□ 0.42
GDNFP39905 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDNFP39905 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
GDNFP39905 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDNFP39905 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GDNFP39905 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
GDNFP39905 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GDNFP39905 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GDNFP39905 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDNFP39905 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.64■□□□□ 0.41
GDNFP39905 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GDNFP39905 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDNFP39905 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GDNFP39905 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.64■□□□□ 0.41
GDNFP39905 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDNFP39905 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GDNFP39905 MIR572-201ENST00000384983 95 ntBASIC17.64■□□□□ 0.41
GDNFP39905 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms